| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is bcr [H]
Identifier: 91784893
GI number: 91784893
Start: 3893952
End: 3895202
Strand: Reverse
Name: bcr [H]
Synonym: Bxe_A0898
Alternate gene names: 91784893
Gene position: 3895202-3893952 (Counterclockwise)
Preceding gene: 91784902
Following gene: 91784892
Centisome position: 79.56
GC content: 64.19
Gene sequence:
>1251_bases ATGGCGGCGCGGCGCTTCATCTGGATTCCCATGTCTCACGTCACCAGAAGCCGGCCCGATGGCCGGCTGATTCTGTTGCT CGGTGCGCTCGCCGCATGCGGGCCGATTTCGATCGATATGTATCTGCCGAGCCTGCCGACCATCGCGCAGGCGTTCGCTA TCAGCACCGGCGCTGCGCAGACCACGCTCACCAGTTTCATGTTCGGCTTTTCGATCGGTATGCTGCTGTATGGTCCGCTG TCGGATACCTATGGCCGCCGGCCGGTGCTGCTCGGCGGGATCGTCATGTATGCGCTGGCCAGCGTGGCCTGTGCGTTGTC GTTCTCGATCGGCTCGCTGGTGATATTCCGGTTCGTGCAGGCGCTGGGCGCGGGCGCGGCTTCGGTGCTGGCGCGCGCCA TTGCACGCGACGCCCACGGACCGGCCGACGCCGCCCGCGTGCTGTCCATGCTCGCCATCGTCACATCGATCGGGCCTTTG CTTGCGCCGCTGATCGGGGGGCAGTTGCTGCTGCTCGGCGGCTGGCGCGTCGTCTTCATCGTGCTGACGCTGTTCGGTAC GGTGTGTGCGGTCACCGCGTTTCTCAAGGTGCCGGAAACGTGGCCGCGCGAGAAGCGCGCGCAGTCGGCGCTGCTGAAAT CGTTCGGCGCATACGGCAAGTTGTTGCGCGATCCGGTTGCGTGGGGGCACATGCTGTGCGGCGGCATGGCGTTCGCGTCG ATGTTCGCGTACATCACGGCAACGCCGTTCGTCTACATCGAGTATTTCCATGTGTCGGCGCAGCATTACGGCTTCCTGTT CGCGTTGAATATCGTCGGCATCATGTTCGGCAACTTCATGAATACGCGGCTTGTCGGCCGGCTTGGCCCGCTGCCGCTCA TTTCTTTTGCCGCAACCGTGAGTTGCATTGCCTCGCTGTTCGTCTGTCTCGTATCGCTGACCGGTTGGGGCGGTCTGTGG TCGATCGTGTTCGGCCTGTTTTTCGTGGTCGGTGTGGTGGGTCTTCTGTCCGCCAACTGCACGACCGATCTGATGCATCG CTATCCGGTGAATGCCGGTGCTGCGGCTGCGGTGTTCGGCGCCGTGCAGCTGGCGCTCGGCGCGCTGTCGAGCCTCGCGG TCGGACTCTGGCAGGATGGCTCGCCCAAAGGTATGGGCGTGGTGGTGGGCGCGGCGGGCCTGCTCTGTTATCTCGGCCGG ATTCTGGTCGTCAGGTGGCACGGAACCAGGGCGCCCGTTGCTGTCGTTTAA
Upstream 100 bases:
>100_bases GCCAACCTGTACGAAGTCGAAGTCCGCGAGCGCATTAACCGTCGAGTACAATTGAAACTGTCAGGTTGCTGCTTTCCCCG TTTCACCTGTTCCGCTGCCG
Downstream 100 bases:
>100_bases AGCCTGGTGAGGCGCAAGCCGCGCGGCGTCTACGGAAAAAACACCAGGTGTTGCGCGCACGCGACCGTGCGTCTCAATTT GCATTGCTATGATGGAGCCA
Product: major facilitator superfamily multidrug efflux transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MAARRFIWIPMSHVTRSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQTTLTSFMFGFSIGMLLYGPL SDTYGRRPVLLGGIVMYALASVACALSFSIGSLVIFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPL LAPLIGGQLLLLGGWRVVFIVLTLFGTVCAVTAFLKVPETWPREKRAQSALLKSFGAYGKLLRDPVAWGHMLCGGMAFAS MFAYITATPFVYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGPLPLISFAATVSCIASLFVCLVSLTGWGGLW SIVFGLFFVVGVVGLLSANCTTDLMHRYPVNAGAAAAVFGAVQLALGALSSLAVGLWQDGSPKGMGVVVGAAGLLCYLGR ILVVRWHGTRAPVAVV
Sequences:
>Translated_416_residues MAARRFIWIPMSHVTRSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQTTLTSFMFGFSIGMLLYGPL SDTYGRRPVLLGGIVMYALASVACALSFSIGSLVIFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPL LAPLIGGQLLLLGGWRVVFIVLTLFGTVCAVTAFLKVPETWPREKRAQSALLKSFGAYGKLLRDPVAWGHMLCGGMAFAS MFAYITATPFVYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGPLPLISFAATVSCIASLFVCLVSLTGWGGLW SIVFGLFFVVGVVGLLSANCTTDLMHRYPVNAGAAAAVFGAVQLALGALSSLAVGLWQDGSPKGMGVVVGAAGLLCYLGR ILVVRWHGTRAPVAVV >Mature_415_residues AARRFIWIPMSHVTRSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQTTLTSFMFGFSIGMLLYGPLS DTYGRRPVLLGGIVMYALASVACALSFSIGSLVIFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLL APLIGGQLLLLGGWRVVFIVLTLFGTVCAVTAFLKVPETWPREKRAQSALLKSFGAYGKLLRDPVAWGHMLCGGMAFASM FAYITATPFVYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGPLPLISFAATVSCIASLFVCLVSLTGWGGLWS IVFGLFFVVGVVGLLSANCTTDLMHRYPVNAGAAAAVFGAVQLALGALSSLAVGLWQDGSPKGMGVVVGAAGLLCYLGRI LVVRWHGTRAPVAVV
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=355, Percent_Identity=36.9014084507042, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI48994889, Length=364, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI87082312, Length=354, Percent_Identity=27.683615819209, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790146, Length=236, Percent_Identity=27.5423728813559, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1787065, Length=259, Percent_Identity=27.7992277992278, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790794, Length=229, Percent_Identity=23.1441048034935, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790195, Length=138, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=161, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319480, Length=341, Percent_Identity=21.1143695014663, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319657, Length=168, Percent_Identity=24.4047619047619, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43788; Mature: 43657
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRFIWIPMSHVTRSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQ CCCCEEEEEEHHHHHCCCCCCCEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHH TTLTSFMFGFSIGMLLYGPLSDTYGRRPVLLGGIVMYALASVACALSFSIGSLVIFRFVQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLLLLGGWRVVFI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH VLTLFGTVCAVTAFLKVPETWPREKRAQSALLKSFGAYGKLLRDPVAWGHMLCGGMAFAS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAYITATPFVYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGPLPLISFAATV HHHHHHHCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SCIASLFVCLVSLTGWGGLWSIVFGLFFVVGVVGLLSANCTTDLMHRYPVNAGAAAAVFG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH AVQLALGALSSLAVGLWQDGSPKGMGVVVGAAGLLCYLGRILVVRWHGTRAPVAVV HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCEEEC >Mature Secondary Structure AARRFIWIPMSHVTRSRPDGRLILLLGALAACGPISIDMYLPSLPTIAQAFAISTGAAQ CCCEEEEEEHHHHHCCCCCCCEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHH TTLTSFMFGFSIGMLLYGPLSDTYGRRPVLLGGIVMYALASVACALSFSIGSLVIFRFVQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLLLLGGWRVVFI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH VLTLFGTVCAVTAFLKVPETWPREKRAQSALLKSFGAYGKLLRDPVAWGHMLCGGMAFAS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAYITATPFVYIEYFHVSAQHYGFLFALNIVGIMFGNFMNTRLVGRLGPLPLISFAATV HHHHHHHCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SCIASLFVCLVSLTGWGGLWSIVFGLFFVVGVVGLLSANCTTDLMHRYPVNAGAAAAVFG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHH AVQLALGALSSLAVGLWQDGSPKGMGVVVGAAGLLCYLGRILVVRWHGTRAPVAVV HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]