| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784868
Identifier: 91784868
GI number: 91784868
Start: 3868758
End: 3869462
Strand: Reverse
Name: 91784868
Synonym: Bxe_A0924
Alternate gene names: NA
Gene position: 3869462-3868758 (Counterclockwise)
Preceding gene: 91784872
Following gene: 91784866
Centisome position: 79.04
GC content: 64.82
Gene sequence:
>705_bases ATGAAAATCGATCGATGGACCCGCCGCGCCACGCTGCTGCTAGCTGGGCTGGCGGTGCTGCTTTCAGGCTGTACGACCTA CGTCACCACGCAGGTCACGGCTTTCTCCGACTGGAGCGGTAGCGACGCCACCCGCACCTATGCGTTCACGCGGGCGGCGA ACCAGCAGAGCAATCTCGAGCTCAGCACCTACGAGCGTTTGGTCGCGAACGAACTCGCCACGCATTCGTTCCGCCAGGTC GACAGCGCGCAGGCGCGCTATCTGGTCGGACTCTCGTACGGAATCCGTTCGGACATGGTGACGGTCTCGGAGCCGGTGTA TTACAACCCGTGGCCGGCGCCGTATTGGGGCTGGGGCCGGCCGTTCGATCCGTGGGGGCCTTGGGGTGGATTCCCCGCCA CGTACGTGAACCAGAGCTATCCGATCTTCACGCATCTGTTGGGTATACGGATCACGGAGCGGGCAACCGGCAAGGAGGTC TACAACGTGACGGCGCGCAATTCGGGCGGCGAATCGTCGCTGGTCCGGGCCATGCCGTATCTGGCGCGTAGCGCGCTGGC CGATTTCCCGCTCGGCAACGGCGTGGTCCACACCGTGAAGATTCCGGTCGACAGGAACGGCGGGGCATCGAACGAAATAG CCGCTACCGGCGCTGCGCCTGCCGCTGCGCCGGCGCCGGCTTCCGGTGCGAAAATCGTTCAGTAG
Upstream 100 bases:
>100_bases GCGTATTATCGGGCGCCCGCCCGGTAAAAAAGCCTGCGCGCCGGACGGGCCGGTCATGATGGACAATACAGAGACATTGA GAAGCTTCACGAGGTAGACC
Downstream 100 bases:
>100_bases GTCACGCGACTGGCGGCGCGCGCTAACGCGCGCGGGGGCTGCAGAGAAAACAGACGGCCCGGCAACTCATCCTTGCCGGG CCGTTTGTTTTGCTGACACC
Product: putative transmembrane lipoprotein
Products: NA
Alternate protein names: Transmembrane Lipoprotein; Lipoprotein Transmembrane
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKIDRWTRRATLLLAGLAVLLSGCTTYVTTQVTAFSDWSGSDATRTYAFTRAANQQSNLELSTYERLVANELATHSFRQV DSAQARYLVGLSYGIRSDMVTVSEPVYYNPWPAPYWGWGRPFDPWGPWGGFPATYVNQSYPIFTHLLGIRITERATGKEV YNVTARNSGGESSLVRAMPYLARSALADFPLGNGVVHTVKIPVDRNGGASNEIAATGAAPAAAPAPASGAKIVQ
Sequences:
>Translated_234_residues MKIDRWTRRATLLLAGLAVLLSGCTTYVTTQVTAFSDWSGSDATRTYAFTRAANQQSNLELSTYERLVANELATHSFRQV DSAQARYLVGLSYGIRSDMVTVSEPVYYNPWPAPYWGWGRPFDPWGPWGGFPATYVNQSYPIFTHLLGIRITERATGKEV YNVTARNSGGESSLVRAMPYLARSALADFPLGNGVVHTVKIPVDRNGGASNEIAATGAAPAAAPAPASGAKIVQ >Mature_234_residues MKIDRWTRRATLLLAGLAVLLSGCTTYVTTQVTAFSDWSGSDATRTYAFTRAANQQSNLELSTYERLVANELATHSFRQV DSAQARYLVGLSYGIRSDMVTVSEPVYYNPWPAPYWGWGRPFDPWGPWGGFPATYVNQSYPIFTHLLGIRITERATGKEV YNVTARNSGGESSLVRAMPYLARSALADFPLGNGVVHTVKIPVDRNGGASNEIAATGAAPAAAPAPASGAKIVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25339; Mature: 25339
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDRWTRRATLLLAGLAVLLSGCTTYVTTQVTAFSDWSGSDATRTYAFTRAANQQSNLE CCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC LSTYERLVANELATHSFRQVDSAQARYLVGLSYGIRSDMVTVSEPVYYNPWPAPYWGWGR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCEEECCCCCCCCCCCC PFDPWGPWGGFPATYVNQSYPIFTHLLGIRITERATGKEVYNVTARNSGGESSLVRAMPY CCCCCCCCCCCCHHHCCCCCCHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH LARSALADFPLGNGVVHTVKIPVDRNGGASNEIAATGAAPAAAPAPASGAKIVQ HHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIDRWTRRATLLLAGLAVLLSGCTTYVTTQVTAFSDWSGSDATRTYAFTRAANQQSNLE CCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC LSTYERLVANELATHSFRQVDSAQARYLVGLSYGIRSDMVTVSEPVYYNPWPAPYWGWGR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCEEECCCCCCCCCCCC PFDPWGPWGGFPATYVNQSYPIFTHLLGIRITERATGKEVYNVTARNSGGESSLVRAMPY CCCCCCCCCCCCHHHCCCCCCHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH LARSALADFPLGNGVVHTVKIPVDRNGGASNEIAATGAAPAAAPAPASGAKIVQ HHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA