| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tyrA [H]
Identifier: 91784814
GI number: 91784814
Start: 3804325
End: 3805257
Strand: Reverse
Name: tyrA [H]
Synonym: Bxe_A0979
Alternate gene names: 91784814
Gene position: 3805257-3804325 (Counterclockwise)
Preceding gene: 91784815
Following gene: 91784813
Centisome position: 77.72
GC content: 68.6
Gene sequence:
>933_bases GTGGCCGCGTTTTCTTTTGACAAACTGGTAATTTTCGGTGTCGGCCTGATCGGCGGATCGCTTGCGCGCGCGTTGCGCGA ACGGAGCGGGACTGAGGGTGCGCGTACGGTGATCGGCGTCGGACGTTCATCCGCCTCGACCGGGCGTGCTCTGGAGCTGG GTGTGATCGACGGCTCGGCGGCGCTGAACGACGCCGCCTCGCTGCGCGAAGCCTTGTCCGGCGCCGACTTGGTGCTGCTG GCCGCGCCCGTCGCGCAGACACAGCCGCTGCTCGAACGCATCGCGCCGTTTCTCGATCCGGCCACGATCGTCACCGACGC GGGCAGCACCAAGTCGGACGTGGTCGCCGCCGCGCGTGCGGCGCTCGGCGCGCGTATCGGCCAGTTCGTGCCAGGGCATC CGATTGCCGGCCGCGAAGCAAGCGGCGTGGAGGCAGCCTTGCCCGACCTGTATGTTGGCCGCAATGTCGTGTTGTGTCCG CTGCCGGAGAACGCGCCGGCAGCCGTGGAGCGCGTCGCGGCCATGTGGCGGGCCACCGGCGCGCTCGTGCGAGACATGGC GCCCGGGCAGCACGACCGCGTGTTCGCATCGGTCAGCCATTTGCCGCACCTGCTCTCGTTCGCGCTGGTCGAGCAGATTC TCAATTCACCCGATGCGGCGCTGAAATTTTCGTTCGCGGCGGGCGGCTTCCGCGACTTCACGCGCATAGCCGCGTCGAGC CCGGAAATGTGGCGCGACGTCTGCGTGGCCAATCGGGTCGCGCTGCTCGACGAACTCGATGCGTATACGGCGGTACTTGC CCGCCTGCGCGCGGCAATCGAAGCCGCCGACGGCGCCGCTCTCGAAACCGTGTTCGCACGCTCGCGCGTGGCGCGCACCG AATGGCAGGAACAGCGCGCTGGCGGCGTCGCCAATGGCGACGCGTCGAAATAA
Upstream 100 bases:
>100_bases TTCGTTGCGGCGCTCGAAAAAGCGCTCGCCACCGTGTAAGCGGTAACCCTTGACCCGCGCGCCTCGTCGGCATGACAGGC GCGCTCTATTTGTGACCGAC
Downstream 100 bases:
>100_bases CCGGAAACTGGACTCAATCATGGAATTCCTCGATCTCGGACCGTTCTCTCGCGCGTCCGGCACGATTCGTCTGCCTGGCT CGAAGAGCATCTCGAACCGG
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAAFSFDKLVIFGVGLIGGSLARALRERSGTEGARTVIGVGRSSASTGRALELGVIDGSAALNDAASLREALSGADLVLL AAPVAQTQPLLERIAPFLDPATIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGREASGVEAALPDLYVGRNVVLCP LPENAPAAVERVAAMWRATGALVRDMAPGQHDRVFASVSHLPHLLSFALVEQILNSPDAALKFSFAAGGFRDFTRIAASS PEMWRDVCVANRVALLDELDAYTAVLARLRAAIEAADGAALETVFARSRVARTEWQEQRAGGVANGDASK
Sequences:
>Translated_310_residues MAAFSFDKLVIFGVGLIGGSLARALRERSGTEGARTVIGVGRSSASTGRALELGVIDGSAALNDAASLREALSGADLVLL AAPVAQTQPLLERIAPFLDPATIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGREASGVEAALPDLYVGRNVVLCP LPENAPAAVERVAAMWRATGALVRDMAPGQHDRVFASVSHLPHLLSFALVEQILNSPDAALKFSFAAGGFRDFTRIAASS PEMWRDVCVANRVALLDELDAYTAVLARLRAAIEAADGAALETVFARSRVARTEWQEQRAGGVANGDASK >Mature_309_residues AAFSFDKLVIFGVGLIGGSLARALRERSGTEGARTVIGVGRSSASTGRALELGVIDGSAALNDAASLREALSGADLVLLA APVAQTQPLLERIAPFLDPATIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGREASGVEAALPDLYVGRNVVLCPL PENAPAAVERVAAMWRATGALVRDMAPGQHDRVFASVSHLPHLLSFALVEQILNSPDAALKFSFAAGGFRDFTRIAASSP EMWRDVCVANRVALLDELDAYTAVLARLRAAIEAADGAALETVFARSRVARTEWQEQRAGGVANGDASK
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 32159; Mature: 32028
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFSFDKLVIFGVGLIGGSLARALRERSGTEGARTVIGVGRSSASTGRALELGVIDGSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEECCCH ALNDAASLREALSGADLVLLAAPVAQTQPLLERIAPFLDPATIVTDAGSTKSDVVAAARA HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHH ALGARIGQFVPGHPIAGREASGVEAALPDLYVGRNVVLCPLPENAPAAVERVAAMWRATG HHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH ALVRDMAPGQHDRVFASVSHLPHLLSFALVEQILNSPDAALKFSFAAGGFRDFTRIAASS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHCCC PEMWRDVCVANRVALLDELDAYTAVLARLRAAIEAADGAALETVFARSRVARTEWQEQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GGVANGDASK CCCCCCCCCC >Mature Secondary Structure AAFSFDKLVIFGVGLIGGSLARALRERSGTEGARTVIGVGRSSASTGRALELGVIDGSA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEECCCH ALNDAASLREALSGADLVLLAAPVAQTQPLLERIAPFLDPATIVTDAGSTKSDVVAAARA HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHH ALGARIGQFVPGHPIAGREASGVEAALPDLYVGRNVVLCPLPENAPAAVERVAAMWRATG HHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH ALVRDMAPGQHDRVFASVSHLPHLLSFALVEQILNSPDAALKFSFAAGGFRDFTRIAASS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHCCC PEMWRDVCVANRVALLDELDAYTAVLARLRAAIEAADGAALETVFARSRVARTEWQEQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GGVANGDASK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]