| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is metI [H]
Identifier: 91784797
GI number: 91784797
Start: 3786564
End: 3787217
Strand: Reverse
Name: metI [H]
Synonym: Bxe_A0996
Alternate gene names: 91784797
Gene position: 3787217-3786564 (Counterclockwise)
Preceding gene: 91784798
Following gene: 91784796
Centisome position: 77.36
GC content: 61.93
Gene sequence:
>654_bases ATGTTGAGTGAAATGCTGGATATGTTCGTCCAGTCGTTCTGGGAAACGCTCGTGATGGTGGGCATTTCCGGACTGGTCGG CGCGTTGGTGGGTTTGCCGCTCGGTGTGCTGCTGTATCTGACGGATCGCCAGGGCGTGCTGCAGAACATCGCGGTGAATC GCGTGATGGGTGTGGTCGTCAATGCGGTTCGTTCGACGCCGTTCATCATCCTGCTGGTGGCCGTGATTCCGTTCACGCGC CTCGTGGTGGGTTCGTCGATCGGTACGGCGGCCGCCGTCGTGCCGCTGACGATCGCCGCCGCGCCGTTCATCGCGCGTCT GGTCGAGACCGCGCTGCGCGAAGTGGATCGAGGGTTGATCGAAGCCGCGCAGGCAATGGGCGCGACCACCAGCCAGATCG TCTTCAAGGTGTTGTTGCCGGAATCGCTGCCGGGCGTGGTCGCCGGCCTGACCATCACCTTCGTCTCGCTGGTCGGCTAT TCGGCAATGGCCGGTGCGATCGGCGGCGGCGGTCTGGGCGATCTCGGCATTCGCTATGGGTATCAGCGTTTCCTGCCGGA AGTGATGTTGACGGTCGTGGTGATTCTGATCGTCTTCGTGCAACTGGTGCAGTCGTTTGGGGATTGGCTCGTGCGTCGCT TGAGCCATAAGTAA
Upstream 100 bases:
>100_bases TTCGGCTCGCTCGCGGTGCTGGCGGGCGGCGAACCGGCGAAGGTGGCGCAGGCATTGACGTATCTGCGTGAACAGGGTGT GGTGGTGGAGGAGCTCTCGT
Downstream 100 bases:
>100_bases AACAACAAAATCGATAGATTCGGGAATGTCCAACATGCAACGTCGTCTCATTCTGAAACTGGCCGCCGCACTCGGCGCCG CGTCACTGTTCGCCACCGGC
Product: ABC methionine transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVVNAVRSTPFIILLVAVIPFTR LVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK
Sequences:
>Translated_217_residues MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVVNAVRSTPFIILLVAVIPFTR LVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK >Mature_217_residues MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVVNAVRSTPFIILLVAVIPFTR LVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=54.8387096774194, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1789033, Length=150, Percent_Identity=31.3333333333333, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22967; Mature: 22967
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI HHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI HHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]