| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ydeG [H]
Identifier: 91784758
GI number: 91784758
Start: 3746665
End: 3747921
Strand: Reverse
Name: ydeG [H]
Synonym: Bxe_A1035
Alternate gene names: 91784758
Gene position: 3747921-3746665 (Counterclockwise)
Preceding gene: 91784759
Following gene: 91784757
Centisome position: 76.55
GC content: 68.58
Gene sequence:
>1257_bases ATGCCGCCGTCCGCCGCTTCCGCCGTTCCCGCCCATTCCATCGGCCCGCACGAAGCCGACCCGCACGGCCGACGCGCCGC GCGCGTGCTGGCCGTGTGCCAGGCGCTGTACACCTCATCGGTATCGATCGATCTGACGTTGACCGGCCTCGTCGGCTACA CGCTCGCCGACGACAAGGCGCTCGCGACGCTGCCGTTCTCGCTGATCACCGTCGCCGCCGCGCTGACGACGATCTTCGCG TCGTTTCTGATGGCGCGCATCGGCCGGCGGGTGGGTTTCGTGCTCGGCGCGGGCGTCGGTGCGCTCGGCGGCGCCGTTTC CGTGTGGGCGATCTTTCACCAGAGTTTCTGGGTTTTCTGCGCGGGCACGGCGACGGTCGGCGTCTTTCAGGCGTTCGCGC AGTACTACCGGCTGGCCGCCGCCGACGCGGTCGGCACGGAAGGAAAGAGCCGCGCGATTTCCACGGTGCTGGCGGGCGGC GTGGTGGCGGCCATCTGCGGGCCGCTCCTTGCCGCATGGAGCAAGGACTGGCTGGCGCCGGTCGCGTTCGCGGGTTCATA TGCGCTCGTGACGGGCTTCGGGCTCGTGTCGGTTGCCTTGCTGGCGCTGCTGTATCGCGACGCGGCGCCGGCTGTTGGCA CGGCGGCGCGCCACGACGCGGCGCGGCCGCTCGGCGAAATCGTGCGGCAGCCGATCTTTGCGGCGGCGCTCGCCAACAAT GCGCTCGGCTACGCCGTGATGATGTTCGTGATGACCGCCACGCCGATCGCCGCGGTCGCTTGCGGCCACACAATTGGCGA CGGCGCGGCGATCATCCAGTGGCACCTGGTCGGCATGTTTGCGCCGTCGCTGTTTTCCGCGCGCCTGATCAAACGCTTTG GCGTGCTGCCGGTGATCGGCGTGGGCATTGCGCTGTCGGCGGCGTGCGGCGTACTTGCGCTGCGTTCGACCGATCTGCCG CATTTCTACGCGGCGCTCGCCTGTCTCGGCGTGGGCTGGAATTTCATGTTCGTCGGCGGCTCGACGCTGCTCGCGCAATC GTACCGGCCGTCGGAACGCGCGAAGACGCAGGCGGCCAGCGAATTCACGACCTTTGCGTTTTCCGCGTTGGGTTCTTTGT TTGCGGGTCAATTGCTGGCGCGCTTCGGCTGGGCGACGATCAACGCCGCGATATTTCCGCTGCTCGGGGCGGCGGCGCTC GCCACGCTGGGCTATGCGTGGTCGCGCAAGCGGCAGGTAATGGAGGAAGTGTCCTGA
Upstream 100 bases:
>100_bases ACCACGGCACATGGCAGAAATTGATGCATCATTGGCATCTCTGCCATCGGCGCCCATGTGACGATCGGGGCATTGCACTT CCGCCGCCCGGAATCTATCG
Downstream 100 bases:
>100_bases TGGCAGCGCGTCATATTGTTTTTGCGGTTGCGCCGGATCTGGTGCTGCTCGACGCATGCGGGCCGCTGGAGGCGTTCTGG CGTGCGGAGTTGACTGTCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPPSAASAVPAHSIGPHEADPHGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKALATLPFSLITVAAALTTIFA SFLMARIGRRVGFVLGAGVGALGGAVSVWAIFHQSFWVFCAGTATVGVFQAFAQYYRLAAADAVGTEGKSRAISTVLAGG VVAAICGPLLAAWSKDWLAPVAFAGSYALVTGFGLVSVALLALLYRDAAPAVGTAARHDAARPLGEIVRQPIFAAALANN ALGYAVMMFVMTATPIAAVACGHTIGDGAAIIQWHLVGMFAPSLFSARLIKRFGVLPVIGVGIALSAACGVLALRSTDLP HFYAALACLGVGWNFMFVGGSTLLAQSYRPSERAKTQAASEFTTFAFSALGSLFAGQLLARFGWATINAAIFPLLGAAAL ATLGYAWSRKRQVMEEVS
Sequences:
>Translated_418_residues MPPSAASAVPAHSIGPHEADPHGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKALATLPFSLITVAAALTTIFA SFLMARIGRRVGFVLGAGVGALGGAVSVWAIFHQSFWVFCAGTATVGVFQAFAQYYRLAAADAVGTEGKSRAISTVLAGG VVAAICGPLLAAWSKDWLAPVAFAGSYALVTGFGLVSVALLALLYRDAAPAVGTAARHDAARPLGEIVRQPIFAAALANN ALGYAVMMFVMTATPIAAVACGHTIGDGAAIIQWHLVGMFAPSLFSARLIKRFGVLPVIGVGIALSAACGVLALRSTDLP HFYAALACLGVGWNFMFVGGSTLLAQSYRPSERAKTQAASEFTTFAFSALGSLFAGQLLARFGWATINAAIFPLLGAAAL ATLGYAWSRKRQVMEEVS >Mature_417_residues PPSAASAVPAHSIGPHEADPHGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKALATLPFSLITVAAALTTIFAS FLMARIGRRVGFVLGAGVGALGGAVSVWAIFHQSFWVFCAGTATVGVFQAFAQYYRLAAADAVGTEGKSRAISTVLAGGV VAAICGPLLAAWSKDWLAPVAFAGSYALVTGFGLVSVALLALLYRDAAPAVGTAARHDAARPLGEIVRQPIFAAALANNA LGYAVMMFVMTATPIAAVACGHTIGDGAAIIQWHLVGMFAPSLFSARLIKRFGVLPVIGVGIALSAACGVLALRSTDLPH FYAALACLGVGWNFMFVGGSTLLAQSYRPSERAKTQAASEFTTFAFSALGSLFAGQLLARFGWATINAAIFPLLGAAALA TLGYAWSRKRQVMEEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43117; Mature: 42985
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSAASAVPAHSIGPHEADPHGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHEEECCCCH LATLPFSLITVAAALTTIFASFLMARIGRRVGFVLGAGVGALGGAVSVWAIFHQSFWVFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEE AGTATVGVFQAFAQYYRLAAADAVGTEGKSRAISTVLAGGVVAAICGPLLAAWSKDWLAP ECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VAFAGSYALVTGFGLVSVALLALLYRDAAPAVGTAARHDAARPLGEIVRQPIFAAALANN HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC ALGYAVMMFVMTATPIAAVACGHTIGDGAAIIQWHLVGMFAPSLFSARLIKRFGVLPVIG HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGIALSAACGVLALRSTDLPHFYAALACLGVGWNFMFVGGSTLLAQSYRPSERAKTQAAS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCHHHHHHHHHH EFTTFAFSALGSLFAGQLLARFGWATINAAIFPLLGAAALATLGYAWSRKRQVMEEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPSAASAVPAHSIGPHEADPHGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHEEECCCCH LATLPFSLITVAAALTTIFASFLMARIGRRVGFVLGAGVGALGGAVSVWAIFHQSFWVFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEE AGTATVGVFQAFAQYYRLAAADAVGTEGKSRAISTVLAGGVVAAICGPLLAAWSKDWLAP ECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VAFAGSYALVTGFGLVSVALLALLYRDAAPAVGTAARHDAARPLGEIVRQPIFAAALANN HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC ALGYAVMMFVMTATPIAAVACGHTIGDGAAIIQWHLVGMFAPSLFSARLIKRFGVLPVIG HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGIALSAACGVLALRSTDLPHFYAALACLGVGWNFMFVGGSTLLAQSYRPSERAKTQAAS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCHHHHHHHHHH EFTTFAFSALGSLFAGQLLARFGWATINAAIFPLLGAAALATLGYAWSRKRQVMEEVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]