| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ohbR
Identifier: 91784683
GI number: 91784683
Start: 3668806
End: 3669132
Strand: Reverse
Name: ohbR
Synonym: Bxe_A1109
Alternate gene names: NA
Gene position: 3669132-3668806 (Counterclockwise)
Preceding gene: 91784686
Following gene: 91784674
Centisome position: 74.94
GC content: 63.91
Gene sequence:
>327_bases GTGTCGAAGACAAGCGAAGATAATGCGCGCCAGTCGCAGGGTGTGCAGTCGGTGGAAATCGGGGCTCGCGTGCTGCGAGC CTATTTGCGGGCGGAAGCGCCCATGAGCGTCAAGGAGCTCGCGGACGAGGTGGACATGTCCACCAGCCGAACGCATCGTT ACCTCGCGAGCCTCGTGCGTGCGGGCCTGATCGAGCGTGACGCGGCGAGCGGGCGCTACGATCTGGGGGAGTTGACCTTG CAGCTGGGTGTGGCGGCCTTGAATCGGCTCAACCCGGTCGCAGAGGCATCAAAGATTAGGTTTGCATTGCGCTCCGGCCG TCGGTGA
Upstream 100 bases:
>100_bases TTATTTGCGTGGCCGTGTTTGCGAGGGCGCTACCGGGGGGTTTGCTAGACTCCGGGCCGGCAGCGTCCGGGAATGAAGAG AGCTAAAACGAGGAAGACGG
Downstream 100 bases:
>100_bases AGGTCCTGAAATCGTACCGATAAACGGCACGTCTGTCGCCGCAATTTTTGCCTGCAATGCCATCAGCACATGCGTAAACG TCAAGCCCACGACAACATCG
Product: IclR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Regulatory Proteins IclR; Transcriptional Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator Family; Regulator; Transcriptional Regulator IclR Family Protein; Transcription Regulator Protein; Transcriptional Regulator Iclr Family; Transcriptional Regulator Protein; Transcriptional Regulator Family Protein; IclR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR IclR Family
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSKTSEDNARQSQGVQSVEIGARVLRAYLRAEAPMSVKELADEVDMSTSRTHRYLASLVRAGLIERDAASGRYDLGELTL QLGVAALNRLNPVAEASKIRFALRSGRR
Sequences:
>Translated_108_residues MSKTSEDNARQSQGVQSVEIGARVLRAYLRAEAPMSVKELADEVDMSTSRTHRYLASLVRAGLIERDAASGRYDLGELTL QLGVAALNRLNPVAEASKIRFALRSGRR >Mature_107_residues SKTSEDNARQSQGVQSVEIGARVLRAYLRAEAPMSVKELADEVDMSTSRTHRYLASLVRAGLIERDAASGRYDLGELTLQ LGVAALNRLNPVAEASKIRFALRSGRR
Specific function: Unknown
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11846; Mature: 11714
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS51077 HTH_ICLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTSEDNARQSQGVQSVEIGARVLRAYLRAEAPMSVKELADEVDMSTSRTHRYLASLVR CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH AGLIERDAASGRYDLGELTLQLGVAALNRLNPVAEASKIRFALRSGRR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKTSEDNARQSQGVQSVEIGARVLRAYLRAEAPMSVKELADEVDMSTSRTHRYLASLVR CCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH AGLIERDAASGRYDLGELTLQLGVAALNRLNPVAEASKIRFALRSGRR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA