| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784389
Identifier: 91784389
GI number: 91784389
Start: 3360053
End: 3361036
Strand: Reverse
Name: 91784389
Synonym: Bxe_A1411
Alternate gene names: NA
Gene position: 3361036-3360053 (Counterclockwise)
Preceding gene: 91784390
Following gene: 91784388
Centisome position: 68.65
GC content: 64.84
Gene sequence:
>984_bases ATGACGGTCGCCGATCTGGTCGCCGGCTTGCGCGAAAGCCGCGGGTTCCGCCACAAGACCGATATCGTGGATGTCGTCGG CTCGCTGGCGAAGCGCTTGCCGCGCGGCAAGCGCGATCTCGCGCAGGCCGTCGCGCTTGGCGACGACTGCGCCGCGCTCG CCGACGGCGACGGCTATCTGCTCTTCGCGATCGAAGGCATGGTCAGCGACTTCGTGAGCGCGATGCCGTGGTTCGCCGGC TATAGCAGCGTGATGGTGAACGTCAGCGATATCTATGCAATGGGCGGACGTCCGCTGGCGGTGGTGGACGCGCTGTGGAG CCAGGGCATTGGCGCTGCGGAGGAAGTGCTGGCGGGTATGGCGGCGGCTTCGGTGGCGTATGGCGTGCCGATTGTCGGCG GGCACACGAATACGCGCAGCGAAGCGGCGCAACTGGCGGTGTCGATTATCGGCCGCGCCAGGGCGCTGCTGTCGAGCTTC AATGCGAAACCGGGCGACAGCCTGATGATGGCGGTCGATCTGCGCGGCCGCTTCGAAGAGCCATATCCGTTCTGGAATGC TTCGGTGGATGCGCCGCCCGAGCGTCTGCGCGCCGACCTCGAACTGCTGCCGCAACTGGCCGAAAACGGTCTATGCGATG CCGCGAAGGATATCAGCATGGCGGGCACACTCGGCACCGCGCTGATGCTGCTCGAATGTTCGCAGGTGGGGGCGCGGATC GATCTCGCGTGTATTCCGAAGCCTGAGGGTGTGCCGCTCGAACGATGGGTGAGCGCGTTTCCGAGTTTCGGTTATCTGCT GTCCGTGCGGCCCGAGCACGTGGAGACCGTACGGGCGAAGTTCAGCGCCCGCTCGCTTGCGTGCTCGGTGATCGGTTCCG TCGACGCAACGAGCCAGGTGGTCCTGCATCGGCAGGATGACGCCGCAACGTTATGGGATTTCCAGCGGGAGCCGTTCATT ATCGGAAAGGATGAGGTGAAATGA
Upstream 100 bases:
>100_bases CGCAGCTGGACCGGTATCCGCCGTGCGCGACGCCTTATGGCGGCTTTGTCACGCAGTCGCAGCCGTCCGCGCGCCGTCGC GAGCGTGAGCGGAGTGCGGC
Downstream 100 bases:
>100_bases GCACGCTGCGTATCGCCTTGCTCACGCATTCGGTCAATCCGCGCGGCGGTGTGGTGCACACGCTCGAACTGGCGTCGGCG TTGACCGCGCTCGGCCACGA
Product: putative thiamine-monophosphate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTVADLVAGLRESRGFRHKTDIVDVVGSLAKRLPRGKRDLAQAVALGDDCAALADGDGYLLFAIEGMVSDFVSAMPWFAG YSSVMVNVSDIYAMGGRPLAVVDALWSQGIGAAEEVLAGMAAASVAYGVPIVGGHTNTRSEAAQLAVSIIGRARALLSSF NAKPGDSLMMAVDLRGRFEEPYPFWNASVDAPPERLRADLELLPQLAENGLCDAAKDISMAGTLGTALMLLECSQVGARI DLACIPKPEGVPLERWVSAFPSFGYLLSVRPEHVETVRAKFSARSLACSVIGSVDATSQVVLHRQDDAATLWDFQREPFI IGKDEVK
Sequences:
>Translated_327_residues MTVADLVAGLRESRGFRHKTDIVDVVGSLAKRLPRGKRDLAQAVALGDDCAALADGDGYLLFAIEGMVSDFVSAMPWFAG YSSVMVNVSDIYAMGGRPLAVVDALWSQGIGAAEEVLAGMAAASVAYGVPIVGGHTNTRSEAAQLAVSIIGRARALLSSF NAKPGDSLMMAVDLRGRFEEPYPFWNASVDAPPERLRADLELLPQLAENGLCDAAKDISMAGTLGTALMLLECSQVGARI DLACIPKPEGVPLERWVSAFPSFGYLLSVRPEHVETVRAKFSARSLACSVIGSVDATSQVVLHRQDDAATLWDFQREPFI IGKDEVK >Mature_326_residues TVADLVAGLRESRGFRHKTDIVDVVGSLAKRLPRGKRDLAQAVALGDDCAALADGDGYLLFAIEGMVSDFVSAMPWFAGY SSVMVNVSDIYAMGGRPLAVVDALWSQGIGAAEEVLAGMAAASVAYGVPIVGGHTNTRSEAAQLAVSIIGRARALLSSFN AKPGDSLMMAVDLRGRFEEPYPFWNASVDAPPERLRADLELLPQLAENGLCDAAKDISMAGTLGTALMLLECSQVGARID LACIPKPEGVPLERWVSAFPSFGYLLSVRPEHVETVRAKFSARSLACSVIGSVDATSQVVLHRQDDAATLWDFQREPFII GKDEVK
Specific function: Unknown
COG id: COG2144
COG function: function code R; Selenophosphate synthetase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0640 and MJ0799 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR011413 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: NA
Molecular weight: Translated: 34841; Mature: 34710
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVADLVAGLRESRGFRHKTDIVDVVGSLAKRLPRGKRDLAQAVALGDDCAALADGDGYL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEECCCCEE LFAIEGMVSDFVSAMPWFAGYSSVMVNVSDIYAMGGRPLAVVDALWSQGIGAAEEVLAGM EEEEHHHHHHHHHHHHHHHCCHHHEEEHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH AAASVAYGVPIVGGHTNTRSEAAQLAVSIIGRARALLSSFNAKPGDSLMMAVDLRGRFEE HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC PYPFWNASVDAPPERLRADLELLPQLAENGLCDAAKDISMAGTLGTALMLLECSQVGARI CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE DLACIPKPEGVPLERWVSAFPSFGYLLSVRPEHVETVRAKFSARSLACSVIGSVDATSQV EEEECCCCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLHRQDDAATLWDFQREPFIIGKDEVK EEECCCCCHHHHHCCCCCEEECCCCCC >Mature Secondary Structure TVADLVAGLRESRGFRHKTDIVDVVGSLAKRLPRGKRDLAQAVALGDDCAALADGDGYL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEECCCCEE LFAIEGMVSDFVSAMPWFAGYSSVMVNVSDIYAMGGRPLAVVDALWSQGIGAAEEVLAGM EEEEHHHHHHHHHHHHHHHCCHHHEEEHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH AAASVAYGVPIVGGHTNTRSEAAQLAVSIIGRARALLSSFNAKPGDSLMMAVDLRGRFEE HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC PYPFWNASVDAPPERLRADLELLPQLAENGLCDAAKDISMAGTLGTALMLLECSQVGARI CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE DLACIPKPEGVPLERWVSAFPSFGYLLSVRPEHVETVRAKFSARSLACSVIGSVDATSQV EEEECCCCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VLHRQDDAATLWDFQREPFIIGKDEVK EEECCCCCHHHHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]