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The map label for this gene is amaB [H]

Identifier: 91784373

GI number: 91784373

Start: 3341046

End: 3342326

Strand: Reverse

Name: amaB [H]

Synonym: Bxe_A1427

Alternate gene names: 91784373

Gene position: 3342326-3341046 (Counterclockwise)

Preceding gene: 91784376

Following gene: 91784372

Centisome position: 68.27

GC content: 63.39

Gene sequence:

>1281_bases
ATGAACGCGGTATCCGAAGCGCTGAAACACGCCGAACCCGCTACGTCGATCAAGGTCGACGGCAAGCGGTTATGGGACAG
CCTGATGACGATGGCGAAGATCGGCGCAACGCCCAAAGGCGGCGTTTGCCGCCTCGCGCTGACCGACCTCGACAAGGAAG
GGCGCGACCTGATAGTCAGTTGGGCGAAGCAAGCCGGTTGCGCGGTCAGTGTCGATCAGATGGGCAACGTGTTCATGCGC
CGCGCCGGGCGCAATCCCGCCGCGCTGCCGGTCGTGACCGGTTCGCACGCTGACTCGCAGCCGACCGGCGGCCGCTTTGA
CGGCATCTACGGTGTGCTGGGCGGCCTCGAAGTGATTCGAAGTCTGAACGATCACGGCATCGAGACGGAGCATCCCGTCG
AAGTGGTGATCTGGACCAACGAGGAAGGCTCGCGCTTCGCGCCGGCAATGGTGGCCTCGGGCGTGTTCGCCGGCGTGTTC
ACACTCGACTACGGCCTTTCGCGCAAGGACGTGGATGGCAAGACCATCGGCGAGGAACTCAAGCGTATCGGCTATGCAGG
CGATCTGCCGTGCGGCGGGCGTCCGCTGCACGCGGCGTTCGAATTGCATATCGAACAGGGACCGATTCTCGAAGCCGAAC
AGAAAACCATCGGCGTGGTGACCGACGCGCAAGGCCAGCGCTGGTACGAAATCACGCTGACGGGACAGGAGGCGCACGCG
GGGCCGACGCCCATGCCGCGCCGCCGCGACGCCTTGCTCGGCGCCGCGCGCGTGGTCGATCTGGTCAATCGCATTGGTCT
GGACAACGCGCCGTTCGGTTGCGCGACGGTCGGCATGATGCAGGTCTATCCGAACTCGCGCAACGTGATTCCGGGCCGCG
TGTTTTTCACCGTCGATTTCCGCCATCCGGACGATGCGGTGCTCGCGAAAATGGATGCCGCGTTGCGCCAGGGCGTCGCG
GATATCGCAAACGGTATTGGTCTTGAAACCGAGTTGGAGCAGATCTTTTATTACGCGCCCGTCGCGTTCGACGAAGCCTG
CATTAAGTCCGTACGCGCGGCTGCGGAACGCTTCGGTTATCCGCATCGCAACATGGTGTCCGGTGCGGGTCACGATGCCT
GTTATCTGTCCCAGGTCGCGCCGACTTCGATGGTGTTCGTGCCATGCGTGGACGGCATCAGTCACAACGAGATCGAAGAC
GCCACCTTCGAGTGGATCGAGGCGGGCGCCAACGTGCTGCTGCACGCCATGCTGGAGCGTGCATGCGAGCCGGTTTCATG
A

Upstream 100 bases:

>100_bases
ATCAAAGGCATCACGCGTGCACCGGCGCCGTGCGGATACGCCCCAAAACCCGCCACCGATGCACCAGTTTTATGTCGGTC
CACCGAAAGGAGCGAGACGA

Downstream 100 bases:

>100_bases
CGACGTCGTAGCGATCCGGCGGTTGCGGTCGTTTCACCCGCTTTACCGTAGTGCCCATAAAACAAGCCGTCCCGGCTGCG
CTCGAAGCGCGGCCGGCGGG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNAVSEALKHAEPATSIKVDGKRLWDSLMTMAKIGATPKGGVCRLALTDLDKEGRDLIVSWAKQAGCAVSVDQMGNVFMR
RAGRNPAALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVF
TLDYGLSRKDVDGKTIGEELKRIGYAGDLPCGGRPLHAAFELHIEQGPILEAEQKTIGVVTDAQGQRWYEITLTGQEAHA
GPTPMPRRRDALLGAARVVDLVNRIGLDNAPFGCATVGMMQVYPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRQGVA
DIANGIGLETELEQIFYYAPVAFDEACIKSVRAAAERFGYPHRNMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIED
ATFEWIEAGANVLLHAMLERACEPVS

Sequences:

>Translated_426_residues
MNAVSEALKHAEPATSIKVDGKRLWDSLMTMAKIGATPKGGVCRLALTDLDKEGRDLIVSWAKQAGCAVSVDQMGNVFMR
RAGRNPAALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVF
TLDYGLSRKDVDGKTIGEELKRIGYAGDLPCGGRPLHAAFELHIEQGPILEAEQKTIGVVTDAQGQRWYEITLTGQEAHA
GPTPMPRRRDALLGAARVVDLVNRIGLDNAPFGCATVGMMQVYPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRQGVA
DIANGIGLETELEQIFYYAPVAFDEACIKSVRAAAERFGYPHRNMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIED
ATFEWIEAGANVLLHAMLERACEPVS
>Mature_426_residues
MNAVSEALKHAEPATSIKVDGKRLWDSLMTMAKIGATPKGGVCRLALTDLDKEGRDLIVSWAKQAGCAVSVDQMGNVFMR
RAGRNPAALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVF
TLDYGLSRKDVDGKTIGEELKRIGYAGDLPCGGRPLHAAFELHIEQGPILEAEQKTIGVVTDAQGQRWYEITLTGQEAHA
GPTPMPRRRDALLGAARVVDLVNRIGLDNAPFGCATVGMMQVYPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRQGVA
DIANGIGLETELEQIFYYAPVAFDEACIKSVRAAAERFGYPHRNMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIED
ATFEWIEAGANVLLHAMLERACEPVS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=404, Percent_Identity=31.9306930693069, Blast_Score=187, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45812; Mature: 45812

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVSEALKHAEPATSIKVDGKRLWDSLMTMAKIGATPKGGVCRLALTDLDKEGRDLIVS
CCHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH
WAKQAGCAVSVDQMGNVFMRRAGRNPAALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIR
HHHHCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFTLDYGLSRKDVDGKTIGEEL
HHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KRIGYAGDLPCGGRPLHAAFELHIEQGPILEAEQKTIGVVTDAQGQRWYEITLTGQEAHA
HHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
GPTPMPRRRDALLGAARVVDLVNRIGLDNAPFGCATVGMMQVYPNSRNVIPGRVFFTVDF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCCCEEEEEEEC
RHPDDAVLAKMDAALRQGVADIANGIGLETELEQIFYYAPVAFDEACIKSVRAAAERFGY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PHRNMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDATFEWIEAGANVLLHAMLER
CCCHHCCCCCCCCEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ACEPVS
HCCCCC
>Mature Secondary Structure
MNAVSEALKHAEPATSIKVDGKRLWDSLMTMAKIGATPKGGVCRLALTDLDKEGRDLIVS
CCHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH
WAKQAGCAVSVDQMGNVFMRRAGRNPAALPVVTGSHADSQPTGGRFDGIYGVLGGLEVIR
HHHHCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFTLDYGLSRKDVDGKTIGEEL
HHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KRIGYAGDLPCGGRPLHAAFELHIEQGPILEAEQKTIGVVTDAQGQRWYEITLTGQEAHA
HHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
GPTPMPRRRDALLGAARVVDLVNRIGLDNAPFGCATVGMMQVYPNSRNVIPGRVFFTVDF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCCCEEEEEEEC
RHPDDAVLAKMDAALRQGVADIANGIGLETELEQIFYYAPVAFDEACIKSVRAAAERFGY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PHRNMVSGAGHDACYLSQVAPTSMVFVPCVDGISHNEIEDATFEWIEAGANVLLHAMLER
CCCHHCCCCCCCCEEHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ACEPVS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]