| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yeiT [H]
Identifier: 91784372
GI number: 91784372
Start: 3339561
End: 3340910
Strand: Reverse
Name: yeiT [H]
Synonym: Bxe_A1428
Alternate gene names: 91784372
Gene position: 3340910-3339561 (Counterclockwise)
Preceding gene: 91784373
Following gene: 91784371
Centisome position: 68.24
GC content: 66.15
Gene sequence:
>1350_bases ATGGCCATCAAGCAAACCGGCGACATTGCCGCTCAGCGCCTGTCGCCCGAGCAGCTCTCGTGCGAGTTCTCCGACATCGC ACCGCTGCTCGACGCGAGCGCCGCGGCCGCGGCGGCGAGCCGCTGTCATTACTGTTACGACGCGCCGTGCGTGAACGCGT GCCCCACGCAGATCGACATTCCCAGTTTCATCCGCAAGATCAGCAACGGCAATCTGAAGGGCGCGGCCGTGGACATTCTG TCGGCCAACCCGATGGGCGGCATGTGCGCACGCGTCTGCCCCACGGAAATTCTTTGTGAAGGCGCTTGCGTGCGCAACCA TCAGGATGCGAAACCAGTGGCGATCGGCGCGCTGCAACGTCATGCGACGGACTGGGCGATGGCGCGCGGCGAAGTGCTGT TCAAGCGCGCGGCGGAAACCGGACGGCACGTCGCGGTGGTCGGCGCGGGTCCGGCGGGACTCGCCTGCGCGCATCGGCTT GCGCTTGCCGGCCACACCGTGACGATCTACGACGCTCACGAAAAAGCCGGCGGCCTGAACGAATACGGCATTGCCGCCTA CAAAACCGTCGATGATTTTGCGCAGCGTGAAGTGGCGTGGCTGTGCTCCGTTGGCGGTATCGAAATCAAACATGGCGTGG CGCTTGGTCGCGATATCGAGCTCGACACGCTGCGCAAGCAGCACGACGCGGTGTTCCTCGCTATCGGCCTCGGCGGCGTG CGGGCGCTCGCGATGGAAGGCGAAGACCTTGGCGGTGTGATGAACGCGGTGGACTTCATCGAACAGGTGCGCAGCGCGAG CGACCTCGGCACGGTGCCGGTGGGCCGGCGCGTCGTCGTGATCGGCGGCGGCAATACGGCGGTGGATGCTGCCGTGCAAA GCCGCAAGCTCGGCGCGGCGTCGGTGACGATGGTGTACCGGCGCGGCGTCGAAGCAATGAGCGCCACCTGGGCCGAGCGC GACTTCGCTCAGACCAGTGGCGTGACGCTCATCACGCATGCCACGCCGATGCGGTTGATTGGCGACAACGGCGTGGTCAC GGGTGTCGAATTCGCACGTGCGTCGAATGATGGCGGCGAGGAGCGCTTCGTAGTCGAAGCCGACATGGTGCTCAAGGCGA TCGGTCAAACGCTGGTGCCGGTCGGCATCGGGCGCGAGTTGCTGACCTTGGACGGTAGCCGTATCGCCGTCGACGCGAAC GGCCAGACCTCGCTGGCAAACGTATGGGCCGGCGGCGATTGCGCGGCCACTGGTGGCATCGATCTCACGGTGCAGGCGGT TCAGGACGGCAAGGTCGCCGCTGCCGCTATCGATGCGCAGTTTGCCCGCACGGCGGCGAAAGCCGCCTGA
Upstream 100 bases:
>100_bases ACCCGCTTTACCGTAGTGCCCATAAAACAAGCCGTCCCGGCTGCGCTCGAAGCGCGGCCGGCGGGAGCGGCTGCGTCCTC ACATCGAAGAAGGAACGAGT
Downstream 100 bases:
>100_bases AGCGAATCGAGCCAAATCACGTAACGAAAACAGACAAAAAACAGCAGTCCCCAAGGAGCCGAAAGCGAATCGAGCCAAAT CACGTAACGAAAACAGACAA
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAIKQTGDIAAQRLSPEQLSCEFSDIAPLLDASAAAAAASRCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGAAVDIL SANPMGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQRHATDWAMARGEVLFKRAAETGRHVAVVGAGPAGLACAHRL ALAGHTVTIYDAHEKAGGLNEYGIAAYKTVDDFAQREVAWLCSVGGIEIKHGVALGRDIELDTLRKQHDAVFLAIGLGGV RALAMEGEDLGGVMNAVDFIEQVRSASDLGTVPVGRRVVVIGGGNTAVDAAVQSRKLGAASVTMVYRRGVEAMSATWAER DFAQTSGVTLITHATPMRLIGDNGVVTGVEFARASNDGGEERFVVEADMVLKAIGQTLVPVGIGRELLTLDGSRIAVDAN GQTSLANVWAGGDCAATGGIDLTVQAVQDGKVAAAAIDAQFARTAAKAA
Sequences:
>Translated_449_residues MAIKQTGDIAAQRLSPEQLSCEFSDIAPLLDASAAAAAASRCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGAAVDIL SANPMGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQRHATDWAMARGEVLFKRAAETGRHVAVVGAGPAGLACAHRL ALAGHTVTIYDAHEKAGGLNEYGIAAYKTVDDFAQREVAWLCSVGGIEIKHGVALGRDIELDTLRKQHDAVFLAIGLGGV RALAMEGEDLGGVMNAVDFIEQVRSASDLGTVPVGRRVVVIGGGNTAVDAAVQSRKLGAASVTMVYRRGVEAMSATWAER DFAQTSGVTLITHATPMRLIGDNGVVTGVEFARASNDGGEERFVVEADMVLKAIGQTLVPVGIGRELLTLDGSRIAVDAN GQTSLANVWAGGDCAATGGIDLTVQAVQDGKVAAAAIDAQFARTAAKAA >Mature_448_residues AIKQTGDIAAQRLSPEQLSCEFSDIAPLLDASAAAAAASRCHYCYDAPCVNACPTQIDIPSFIRKISNGNLKGAAVDILS ANPMGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQRHATDWAMARGEVLFKRAAETGRHVAVVGAGPAGLACAHRLA LAGHTVTIYDAHEKAGGLNEYGIAAYKTVDDFAQREVAWLCSVGGIEIKHGVALGRDIELDTLRKQHDAVFLAIGLGGVR ALAMEGEDLGGVMNAVDFIEQVRSASDLGTVPVGRRVVVIGGGNTAVDAAVQSRKLGAASVTMVYRRGVEAMSATWAERD FAQTSGVTLITHATPMRLIGDNGVVTGVEFARASNDGGEERFVVEADMVLKAIGQTLVPVGIGRELLTLDGSRIAVDANG QTSLANVWAGGDCAATGGIDLTVQAVQDGKVAAAAIDAQFARTAAKAA
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=455, Percent_Identity=32.967032967033, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI237757300, Length=109, Percent_Identity=45.8715596330275, Blast_Score=89, Evalue=7e-18, Organism=Escherichia coli, GI1788468, Length=417, Percent_Identity=34.2925659472422, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1789606, Length=464, Percent_Identity=32.5431034482759, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI87082180, Length=460, Percent_Identity=33.0434782608696, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1788811, Length=462, Percent_Identity=33.1168831168831, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1789243, Length=381, Percent_Identity=27.5590551181102, Blast_Score=110, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71984108, Length=449, Percent_Identity=33.8530066815145, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI17570289, Length=450, Percent_Identity=27.3333333333333, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320030, Length=459, Percent_Identity=30.718954248366, Blast_Score=140, Evalue=4e-34, Organism=Drosophila melanogaster, GI24640763, Length=453, Percent_Identity=33.9955849889625, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI18858217, Length=453, Percent_Identity=33.9955849889625, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24665547, Length=445, Percent_Identity=29.6629213483146, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24665543, Length=445, Percent_Identity=29.6629213483146, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI28574881, Length=445, Percent_Identity=29.6629213483146, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24665539, Length=445, Percent_Identity=29.6629213483146, Blast_Score=152, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 46512; Mature: 46381
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKQTGDIAAQRLSPEQLSCEFSDIAPLLDASAAAAAASRCHYCYDAPCVNACPTQIDI CCCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCH PSFIRKISNGNLKGAAVDILSANPMGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQR HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMARGEVLFKRAAETGRHVAVVGAGPAGLACAHRLALAGHTVTIYDAHEKAGGLN HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECHHHCCCCC EYGIAAYKTVDDFAQREVAWLCSVGGIEIKHGVALGRDIELDTLRKQHDAVFLAIGLGGV CCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCHHHHHHCCCEEEEEEECCCE RALAMEGEDLGGVMNAVDFIEQVRSASDLGTVPVGRRVVVIGGGNTAVDAAVQSRKLGAA EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHH SVTMVYRRGVEAMSATWAERDFAQTSGVTLITHATPMRLIGDNGVVTGVEFARASNDGGE HHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCEECEEHEECCCCCCC ERFVVEADMVLKAIGQTLVPVGIGRELLTLDGSRIAVDANGQTSLANVWAGGDCAATGGI CEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCEEECCCC DLTVQAVQDGKVAAAAIDAQFARTAAKAA EEEEEEECCCCEEEEHHHHHHHHHHHHCC >Mature Secondary Structure AIKQTGDIAAQRLSPEQLSCEFSDIAPLLDASAAAAAASRCHYCYDAPCVNACPTQIDI CCCCCCHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCH PSFIRKISNGNLKGAAVDILSANPMGGMCARVCPTEILCEGACVRNHQDAKPVAIGALQR HHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMARGEVLFKRAAETGRHVAVVGAGPAGLACAHRLALAGHTVTIYDAHEKAGGLN HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECHHHCCCCC EYGIAAYKTVDDFAQREVAWLCSVGGIEIKHGVALGRDIELDTLRKQHDAVFLAIGLGGV CCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCHHHHHHCCCEEEEEEECCCE RALAMEGEDLGGVMNAVDFIEQVRSASDLGTVPVGRRVVVIGGGNTAVDAAVQSRKLGAA EEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHH SVTMVYRRGVEAMSATWAERDFAQTSGVTLITHATPMRLIGDNGVVTGVEFARASNDGGE HHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCEECEEHEECCCCCCC ERFVVEADMVLKAIGQTLVPVGIGRELLTLDGSRIAVDANGQTSLANVWAGGDCAATGGI CEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCEEECCCC DLTVQAVQDGKVAAAAIDAQFARTAAKAA EEEEEEECCCCEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]