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The map label for this gene is yecS [H]

Identifier: 91784367

GI number: 91784367

Start: 3333130

End: 3333807

Strand: Reverse

Name: yecS [H]

Synonym: Bxe_A1433

Alternate gene names: 91784367

Gene position: 3333807-3333130 (Counterclockwise)

Preceding gene: 91784368

Following gene: 91784366

Centisome position: 68.09

GC content: 61.8

Gene sequence:

>678_bases
ATGCCGGCATGGTTGCATCTGATGGCGCAGTCGCTGTGGCCCCTGCTGTATGCGGGGCTCGTGTTCACCGTGCCGCTCAC
GCTGATATCGTTTGCGATCGGGCTGGCGCTCGCGTTCCTCGTCGCGCTGGTGCGTCTGTTCGGACCGAAGTGGGCCGTCG
CGATCGTGCGCTTCTACGTGTGGCTGTTTCGCGGCTCACCGTTGCTCGTGCAACTATTCGTGATCTTCTACGGATTGCCG
AACGTGGGCATCGTGCTCGATCCGTTGACGGCGGCGATCATCGGCTTTTCGCTGAATGTCGGCGCGTATAACTCCGAAGT
GATACGCGGTGTGATCGAGTCGATCCCGAAAGGACAGTGGGAAGCGGCGTATTCGATGGGTATGACGCGCGAGCAGGCCT
TGCGTCGCGCGATCCTGCCGCAAGCGGCGCGCGTTGCGCTGCCGCCGTTGTCGAATTCGTTTATCGCTCTGGTGAAAGAC
ACCTCGCTCGCCGCGGTGCTGACCGTGCCTGAAGTGTTTCAGGCGGCGCAGCGGATCGCGTCGGTGACTTACGAGCCGCT
GATCCTGTACACCGAGGCGGCCCTGGTTTATCTGGTCTTCAGTTCGGTGTTGTCGTCGGCGCAGGTCAGGCTCGAGCGCA
AATTCGGCCGCCACGCACTTTTCCATGCAGGCAACTGA

Upstream 100 bases:

>100_bases
CGCTCGCCGACATCAGGAAAGACGGCACCTACGCGAAGATTTCGCAGAAGTATTTCGGCAAGGACGTCTCCCAGTAAACG
CCTTTCCGCGAGTCTGAATC

Downstream 100 bases:

>100_bases
TGATCCGACTGGAAAAAATCGACAAGTACTTCGGCGGCCAACGGGTACTGAACTCGGTCGATCTTCAACTTGCCTCGGGT
AATGTCACCGCCTTGATCGG

Product: ABC polar amino acid transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYVWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKD
TSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHALFHAGN

Sequences:

>Translated_225_residues
MPAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYVWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKD
TSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHALFHAGN
>Mature_224_residues
PAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYVWLFRGSPLLVQLFVIFYGLPN
VGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDT
SLAAVLTVPEVFQAAQRIASVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHALFHAGN

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=52.9680365296804, Blast_Score=213, Evalue=7e-57,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=36.4532019704434, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=33.9622641509434, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1787086, Length=211, Percent_Identity=33.175355450237, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=33.1730769230769, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=35.1485148514851, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787087, Length=210, Percent_Identity=29.5238095238095, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786873, Length=199, Percent_Identity=35.678391959799, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=25.9433962264151, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=36, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24673; Mature: 24541

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
EAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIA
HHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
SVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHALFHAGN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
PAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
EAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIA
HHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
SVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGRHALFHAGN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]