| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784317
Identifier: 91784317
GI number: 91784317
Start: 3278079
End: 3278942
Strand: Reverse
Name: 91784317
Synonym: Bxe_A1483
Alternate gene names: NA
Gene position: 3278942-3278079 (Counterclockwise)
Preceding gene: 91784318
Following gene: 91784316
Centisome position: 66.97
GC content: 62.15
Gene sequence:
>864_bases ATGAACGATGCTCGATCGAACGCGAATGAAGGCCATATCGCTCCTTCGGCGGAGGCGAACGCATTGGCGCTTGACGCGGC AGTTATAGAAGATTTCGCATGCAACGGAGCGGTCTGCTTACGCGGTGTCTTTTCAACGGAGTGGGTGGATATCGTGCGGC GAGGGATCGAAAGAAATCTGGCCGCGCCGGGACCCGCAGCGAGCTTTGCCGATGGAAGCGAGAAGCGCTTCTTTCAGGAC TCCAACAACTGGCAACGGATCGAAGAGTTTGAAGCCTTCGTGCGCTTATCGCCGGCGCGGCTGATTGCGGCTCAACTGTT TTCCAGCCGAACGGTGACTTTTCTGCATGACCATGTATTGGTGAAGTACGCGGGTGCGACGAAGCCGACACCGTGGCATC AGGATCAACCGTATAGCCCGGTCGAGGGATCGCAGTTCTGCACGATGTGGATGCCGGTCGATCCCGTGCCGCGCGAGGCG GTGCTGGAGTTCGTGGGAGGCTCGCAGCGATCCGGCACCTGGTATCGGCCGCAGCGCTTCATTGACGGATCGCTGCGCGT GGACGACGATCCGCGCTGGGCGTTGCTTCCGGACATTGAAGCGGACCGCCCGGCATGGCCCATTCTGGGATGGGACGTTC AACCGGGTGACGTGCTGGTCTTTCACGGGCTGACCCTTCACGGCGCACCAGGCAACTTGCGCGACACGCCCCGGCGGGTT CTGTCGACGCGCTGGCTGGGCGATGATGCGCGTATCCGGCGCCGCAGCGGGAAAATGTCTCCGCCTCTTCCCGACGACGC ACCGGCTGACGGCGAGCCGTTTGCGTGCGAGCATTTCCCGCTCGTCTGGACGGACAAGGAGTGA
Upstream 100 bases:
>100_bases ACATCGAGACAATGAAAAACTGGGCATTGGAGAGTTCCAGGCCGGGCATTGTCAACACGCTATTCGATATCTGACCGACA GCTTCCATCGGGGAGAGAAA
Downstream 100 bases:
>100_bases GGCTGTTCGAGAACGCGGGCGCGCCGGCACGGGTAGCGCTCGCCTCGTGAGTCCCGAGCGGGACCGATTCATCAACCCCG GTGTGAGGCACCGCCGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Protein; Phytanoyl-CoA Dioxygenase Superfamily
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNDARSNANEGHIAPSAEANALALDAAVIEDFACNGAVCLRGVFSTEWVDIVRRGIERNLAAPGPAASFADGSEKRFFQD SNNWQRIEEFEAFVRLSPARLIAAQLFSSRTVTFLHDHVLVKYAGATKPTPWHQDQPYSPVEGSQFCTMWMPVDPVPREA VLEFVGGSQRSGTWYRPQRFIDGSLRVDDDPRWALLPDIEADRPAWPILGWDVQPGDVLVFHGLTLHGAPGNLRDTPRRV LSTRWLGDDARIRRRSGKMSPPLPDDAPADGEPFACEHFPLVWTDKE
Sequences:
>Translated_287_residues MNDARSNANEGHIAPSAEANALALDAAVIEDFACNGAVCLRGVFSTEWVDIVRRGIERNLAAPGPAASFADGSEKRFFQD SNNWQRIEEFEAFVRLSPARLIAAQLFSSRTVTFLHDHVLVKYAGATKPTPWHQDQPYSPVEGSQFCTMWMPVDPVPREA VLEFVGGSQRSGTWYRPQRFIDGSLRVDDDPRWALLPDIEADRPAWPILGWDVQPGDVLVFHGLTLHGAPGNLRDTPRRV LSTRWLGDDARIRRRSGKMSPPLPDDAPADGEPFACEHFPLVWTDKE >Mature_287_residues MNDARSNANEGHIAPSAEANALALDAAVIEDFACNGAVCLRGVFSTEWVDIVRRGIERNLAAPGPAASFADGSEKRFFQD SNNWQRIEEFEAFVRLSPARLIAAQLFSSRTVTFLHDHVLVKYAGATKPTPWHQDQPYSPVEGSQFCTMWMPVDPVPREA VLEFVGGSQRSGTWYRPQRFIDGSLRVDDDPRWALLPDIEADRPAWPILGWDVQPGDVLVFHGLTLHGAPGNLRDTPRRV LSTRWLGDDARIRRRSGKMSPPLPDDAPADGEPFACEHFPLVWTDKE
Specific function: Unknown
COG id: COG5285
COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31997; Mature: 31997
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDARSNANEGHIAPSAEANALALDAAVIEDFACNGAVCLRGVFSTEWVDIVRRGIERNL CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC AAPGPAASFADGSEKRFFQDSNNWQRIEEFEAFVRLSPARLIAAQLFSSRTVTFLHDHVL CCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEE VKYAGATKPTPWHQDQPYSPVEGSQFCTMWMPVDPVPREAVLEFVGGSQRSGTWYRPQRF EEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHH IDGSLRVDDDPRWALLPDIEADRPAWPILGWDVQPGDVLVFHGLTLHGAPGNLRDTPRRV CCCCEEECCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEECEEEECCCCCCCHHHHHH LSTRWLGDDARIRRRSGKMSPPLPDDAPADGEPFACEHFPLVWTDKE HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEECCC >Mature Secondary Structure MNDARSNANEGHIAPSAEANALALDAAVIEDFACNGAVCLRGVFSTEWVDIVRRGIERNL CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC AAPGPAASFADGSEKRFFQDSNNWQRIEEFEAFVRLSPARLIAAQLFSSRTVTFLHDHVL CCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEE VKYAGATKPTPWHQDQPYSPVEGSQFCTMWMPVDPVPREAVLEFVGGSQRSGTWYRPQRF EEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHH IDGSLRVDDDPRWALLPDIEADRPAWPILGWDVQPGDVLVFHGLTLHGAPGNLRDTPRRV CCCCEEECCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEECEEEECCCCCCCHHHHHH LSTRWLGDDARIRRRSGKMSPPLPDDAPADGEPFACEHFPLVWTDKE HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA