Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yfhC [C]

Identifier: 91784309

GI number: 91784309

Start: 3269580

End: 3270122

Strand: Reverse

Name: yfhC [C]

Synonym: Bxe_A1491

Alternate gene names: 91784309

Gene position: 3270122-3269580 (Counterclockwise)

Preceding gene: 91784310

Following gene: 91784307

Centisome position: 66.79

GC content: 65.93

Gene sequence:

>543_bases
GTGAGTCTGACCGTCCCGACGCAGGCCGCCGCAGCAGCCGCGAACTATCCGCCGCAGGGTTTGACGCCCACGCACGAGCA
GATCGTGCGGCATCTGCGGCATTCGAGCCGGGTGGCCGAACGGGCGACGCTGCTGGGGCATCATCCGTTTGGCGCGGTGC
TGGTCGGGCCGGACCAGGAGACGGTGCTGATGGAGCAGGGCAACGTCGACACGGTGAATCACGCCGAGTCGGTGCTGGCG
CGCGTGGCCGCGCTGAACTTCACGCCGGCGTATTTGTGGAGTTGCACGCTGTACACGTCGGTCGAGCCTTGCTGTATGTG
CGCCGGGACCATGTATTGGGCCAACATCGGCCGGGTGGTGTTCGGCATGACCGAAAAGCGCCTGCTGGAGGCGACCGGCG
CTCACGCCGAGAATCCGACCATGAGCGTGGATTGCCGGTATGTCTTCGATCATTGCCAGAAACCGGTCGAGGTGATCGGG
CCGGTCGCCGAGGTGGAGGCCGAGGTGATGGAGGTTCAGCGTCGATTCTGGAGCGGCCGGTAG

Upstream 100 bases:

>100_bases
GGAACTGCTGCGTTTGAACTGGTTCGTGCAGGGCGTGGACGGTTCGCTGCCGAAGTAGAATTTGCTTCGCTACGCTAACT
ATTGTTCAAGGAGATCGCCC

Downstream 100 bases:

>100_bases
CGGCTGTTTCGTGATTTCGTGAAAGCGGCGCTTCTGCGTTGCTACGGTATCGAGGCGGCGTCCCACGCCGGTCTCGCGCA
AACGGCGACCAGGCATGCCT

Product: putative cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: Cytosine/Adenosine Deaminase; Cytidine/Deoxycytidine Deaminase; Purine Deaminase Protein; CMP/DCMP Deaminase; Cytidine/Deoxycytidylate Deaminase; Guanine Deaminase; Cytosine Deaminase; Cytidine And Deoxycytidylate Deaminase

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSLTVPTQAAAAAANYPPQGLTPTHEQIVRHLRHSSRVAERATLLGHHPFGAVLVGPDQETVLMEQGNVDTVNHAESVLA
RVAALNFTPAYLWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPTMSVDCRYVFDHCQKPVEVIG
PVAEVEAEVMEVQRRFWSGR

Sequences:

>Translated_180_residues
MSLTVPTQAAAAAANYPPQGLTPTHEQIVRHLRHSSRVAERATLLGHHPFGAVLVGPDQETVLMEQGNVDTVNHAESVLA
RVAALNFTPAYLWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPTMSVDCRYVFDHCQKPVEVIG
PVAEVEAEVMEVQRRFWSGR
>Mature_179_residues
SLTVPTQAAAAAANYPPQGLTPTHEQIVRHLRHSSRVAERATLLGHHPFGAVLVGPDQETVLMEQGNVDTVNHAESVLAR
VAALNFTPAYLWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPTMSVDCRYVFDHCQKPVEVIGP
VAEVEAEVMEVQRRFWSGR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19780; Mature: 19649

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTVPTQAAAAAANYPPQGLTPTHEQIVRHLRHSSRVAERATLLGHHPFGAVLVGPDQE
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TVLMEQGNVDTVNHAESVLARVAALNFTPAYLWSCTLYTSVEPCCMCAGTMYWANIGRVV
EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FGMTEKRLLEATGAHAENPTMSVDCRYVFDHCQKPVEVIGPVAEVEAEVMEVQRRFWSGR
HCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLTVPTQAAAAAANYPPQGLTPTHEQIVRHLRHSSRVAERATLLGHHPFGAVLVGPDQE
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
TVLMEQGNVDTVNHAESVLARVAALNFTPAYLWSCTLYTSVEPCCMCAGTMYWANIGRVV
EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FGMTEKRLLEATGAHAENPTMSVDCRYVFDHCQKPVEVIGPVAEVEAEVMEVQRRFWSGR
HCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA