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The map label for this gene is yqhC [C]

Identifier: 91784294

GI number: 91784294

Start: 3253976

End: 3254524

Strand: Reverse

Name: yqhC [C]

Synonym: Bxe_A1506

Alternate gene names: 91784294

Gene position: 3254524-3253976 (Counterclockwise)

Preceding gene: 91784296

Following gene: 91784293

Centisome position: 66.48

GC content: 67.58

Gene sequence:

>549_bases
ATGCCTCCTCGCAAAGACCATCACGACCAGCCGCTTGTCCCGGCCTCTGCACAGGTCGACGCTCCGGCGTTGCAAGATCC
GGTCCTGCTGCGCCGGCTGTTACGCGCCAAAGACCGCATGGACGCCGCCTCCCACGAGGCCTGGCCCGTCAAGCGCCTCG
CTGGCGTCAGCGGCGTGACCGAAGCGCATTTCGCGCGCTCCTTCAAGTGCGCCTTCGGCGTGCCGCCGCACCGCTACCTG
CTGACACGCCGCATCGAGCAGGCCGTCACCCTGTTGCGCGACACCGGGCTCAGCATCACGGAAATTGCTTTTGCCACGGG
CTGGGAGAGCCTGGGGAGCTTCGGCCGCATCTTTCGCGACATCACCGGCCAGAGCCCCGGCGCCATGCGCGTCCAGGCCC
GAGCCCAGGCCAGCACCGCGCAACTCGACCGCGTGCCCGCCTGTGTGCTGAAGGCCGCGCAGCGCCCGGATCTCACCATC
GCAGTTTTGGAGAAGCGTCGCCGCACGGTCGAAGATACAGTCCTGCCATCAACCAGGGAGGTGTCATGA

Upstream 100 bases:

>100_bases
CGGCGAACTCAAAGCGCGCGGCTTGATGGGCACGCGCGGTATGGCCCACGAAGCACTCGCGCGAGCCTAAACTACGCATT
CCCCCAGCGCCCCCGGACTC

Downstream 100 bases:

>100_bases
ACGAGGGTATCAATGTGGTGGGCCTGTATGTCGATAACCAGGACGAAGCGCTGGCGTTCTATGTCGACAAGCTCGGATTC
CGCGTGCATACGGACGTGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Helix-Turn-Helix- Domain Containing Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; DJ-1/PfpI Family; AraC Family Regulatory Protein; AraC-Like Transcription Regulator; Helix-Turn-Helix Transcriptional Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Arac Family Transcriptional Regulator; Regulatory Protein PocR; GntR Family Regulatory Protein; AraC Family Helix-Turn-Helix Transcriptional Regulator; AraC Family Regulatory Helix-Turn-Helix; Transcriptional Regulator AraC Family Isolated Domain

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPPRKDHHDQPLVPASAQVDAPALQDPVLLRRLLRAKDRMDAASHEAWPVKRLAGVSGVTEAHFARSFKCAFGVPPHRYL
LTRRIEQAVTLLRDTGLSITEIAFATGWESLGSFGRIFRDITGQSPGAMRVQARAQASTAQLDRVPACVLKAAQRPDLTI
AVLEKRRRTVEDTVLPSTREVS

Sequences:

>Translated_182_residues
MPPRKDHHDQPLVPASAQVDAPALQDPVLLRRLLRAKDRMDAASHEAWPVKRLAGVSGVTEAHFARSFKCAFGVPPHRYL
LTRRIEQAVTLLRDTGLSITEIAFATGWESLGSFGRIFRDITGQSPGAMRVQARAQASTAQLDRVPACVLKAAQRPDLTI
AVLEKRRRTVEDTVLPSTREVS
>Mature_181_residues
PPRKDHHDQPLVPASAQVDAPALQDPVLLRRLLRAKDRMDAASHEAWPVKRLAGVSGVTEAHFARSFKCAFGVPPHRYLL
TRRIEQAVTLLRDTGLSITEIAFATGWESLGSFGRIFRDITGQSPGAMRVQARAQASTAQLDRVPACVLKAAQRPDLTIA
VLEKRRRTVEDTVLPSTREVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20079; Mature: 19948

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRKDHHDQPLVPASAQVDAPALQDPVLLRRLLRAKDRMDAASHEAWPVKRLAGVSGVT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCH
EAHFARSFKCAFGVPPHRYLLTRRIEQAVTLLRDTGLSITEIAFATGWESLGSFGRIFRD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
ITGQSPGAMRVQARAQASTAQLDRVPACVLKAAQRPDLTIAVLEKRRRTVEDTVLPSTRE
HCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VS
CC
>Mature Secondary Structure 
PPRKDHHDQPLVPASAQVDAPALQDPVLLRRLLRAKDRMDAASHEAWPVKRLAGVSGVT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCH
EAHFARSFKCAFGVPPHRYLLTRRIEQAVTLLRDTGLSITEIAFATGWESLGSFGRIFRD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHH
ITGQSPGAMRVQARAQASTAQLDRVPACVLKAAQRPDLTIAVLEKRRRTVEDTVLPSTRE
HCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA