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The map label for this gene is codA [H]

Identifier: 91784268

GI number: 91784268

Start: 3222906

End: 3224198

Strand: Reverse

Name: codA [H]

Synonym: Bxe_A1533

Alternate gene names: 91784268

Gene position: 3224198-3222906 (Counterclockwise)

Preceding gene: 91784269

Following gene: 91784266

Centisome position: 65.86

GC content: 66.59

Gene sequence:

>1293_bases
ATGGATCTGATCATCCGCCGCGCGATGCTGCCTGCGGGCGCCGCGCCGCAACACAAAGAGCCGGTCGACATCGGCATCGA
AGCGGGCCGCATCGTCGCCGTCGAGCCCAATCTGGCCGCCGGCGCGCGCGAAGAAATCGATGCCGCGGGTTCGCTCGTCA
CGCCGCCTTTCGTCGATCCGCATTTCCATATGGACGCGACGCTCTCGTACGGTTTGCCGCGCGTGAACGCGTCCGGCACG
CTGCTCGAGGGCATTGCATTGTGGGGCGAACTGAAACCTGACCTGACGCAGGAGGCGCTGATCGAGCGCGCGCTGCAGTA
TTGCGACTGGGCCGTCGCGCGCGGGCTGCTGGCTATCCGCAGCCACGTGGATGTGTGCGATCCGCGCCTGCTCGCGGTGG
AGGCATTGGTGGAAGTGAAACGCCGTGTCGCGCCGTATCTCGACCTGCAACTGGTAGCCTTTCCGCAAGACGGCGTATTG
CGCAGCGCGGGCGCGTTCGAAAACCTCAAACGGTCGATCGCGATGGGCGTGGACGTGGTCGGCGGCATACCGCATTTCGA
GCGCACGATGGCCGACGGCGCGCAGTCCGTGCGCCTCCTGTGCGAGTACGCGGCCGAGCAGGGCTTGCGCGTCGACATGC
ATTGCGATGAATCGGACGATCCGATGTCGCGCCACATCGAGACGCTTGCTGCCGAAACGCATCGGCTGGGTTTGCAAGGG
CGCGTGACCGGCTCGCATCTGACCTCCATGCATTCAATGGACAACTACTACGTCAGCAAGCTCCTGCCGCTGATGCGCGA
GGCGGGTGTCGCGGCGATTGCGAATCCGCTGATCAACATCACGCTGCAAGGCCGCAGCGATACCTATCCGAAACGGCGCG
GCATGACGCGCGTACCGGAGATGATGGCGGCGGGCATCAACGTCGCGTTCGGCCACGATTGCGTGATGGACCCGTGGTAC
AGCCTCGGTTCGGGCGACATGCTCGAAGTCGCGCACATGGGCTTGCATGTGGCGCAGATGACGGGTGTCGACGGCATGCG
CGCCTGTTTCGACGCGGTGACGGTGAACGCCGCGCGCATTCTCGGTCTGGAGGGCTACGGCATCGCGCCGGGCTGCGCGG
CCAATCTCGTGCTGCTCGACGCGCGCGATCCGGTGGAAGCGATCCGCCTGCGCGCCGCGCGTCTCGCGGTGGTGAGCCGC
GGCAAGGTGGTCAGCCGCGCGCCGGCGGCGCGCGCGGCGCTGTCGCTCGAAGGGCGGCCTTCGGAGGTGGATTTCAAGCT
GCATCGCGGCTGA

Upstream 100 bases:

>100_bases
CGGTACGGGCGGACGCAACGCGCCGGATAAAAACGTCGGCAAGCGCTTTCTGACGCCGATAGAATCGTCATCAATCAGCA
AGGGTCAAAGGGAGCGATAC

Downstream 100 bases:

>100_bases
TTGCGCAGCGCAGTCAGCGCTCAAGAACAAAAAAAGCCGGTGCCTGCGTCGAGCAGGTCACCGGCTTTCATCGGCCCATG
CAAGGCGCCGACGCGTATAT

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDLIIRRAMLPAGAAPQHKEPVDIGIEAGRIVAVEPNLAAGAREEIDAAGSLVTPPFVDPHFHMDATLSYGLPRVNASGT
LLEGIALWGELKPDLTQEALIERALQYCDWAVARGLLAIRSHVDVCDPRLLAVEALVEVKRRVAPYLDLQLVAFPQDGVL
RSAGAFENLKRSIAMGVDVVGGIPHFERTMADGAQSVRLLCEYAAEQGLRVDMHCDESDDPMSRHIETLAAETHRLGLQG
RVTGSHLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPEMMAAGINVAFGHDCVMDPWY
SLGSGDMLEVAHMGLHVAQMTGVDGMRACFDAVTVNAARILGLEGYGIAPGCAANLVLLDARDPVEAIRLRAARLAVVSR
GKVVSRAPAARAALSLEGRPSEVDFKLHRG

Sequences:

>Translated_430_residues
MDLIIRRAMLPAGAAPQHKEPVDIGIEAGRIVAVEPNLAAGAREEIDAAGSLVTPPFVDPHFHMDATLSYGLPRVNASGT
LLEGIALWGELKPDLTQEALIERALQYCDWAVARGLLAIRSHVDVCDPRLLAVEALVEVKRRVAPYLDLQLVAFPQDGVL
RSAGAFENLKRSIAMGVDVVGGIPHFERTMADGAQSVRLLCEYAAEQGLRVDMHCDESDDPMSRHIETLAAETHRLGLQG
RVTGSHLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPEMMAAGINVAFGHDCVMDPWY
SLGSGDMLEVAHMGLHVAQMTGVDGMRACFDAVTVNAARILGLEGYGIAPGCAANLVLLDARDPVEAIRLRAARLAVVSR
GKVVSRAPAARAALSLEGRPSEVDFKLHRG
>Mature_430_residues
MDLIIRRAMLPAGAAPQHKEPVDIGIEAGRIVAVEPNLAAGAREEIDAAGSLVTPPFVDPHFHMDATLSYGLPRVNASGT
LLEGIALWGELKPDLTQEALIERALQYCDWAVARGLLAIRSHVDVCDPRLLAVEALVEVKRRVAPYLDLQLVAFPQDGVL
RSAGAFENLKRSIAMGVDVVGGIPHFERTMADGAQSVRLLCEYAAEQGLRVDMHCDESDDPMSRHIETLAAETHRLGLQG
RVTGSHLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPEMMAAGINVAFGHDCVMDPWY
SLGSGDMLEVAHMGLHVAQMTGVDGMRACFDAVTVNAARILGLEGYGIAPGCAANLVLLDARDPVEAIRLRAARLAVVSR
GKVVSRAPAARAALSLEGRPSEVDFKLHRG

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=405, Percent_Identity=45.1851851851852, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1786517, Length=397, Percent_Identity=27.2040302267003, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46335; Mature: 46335

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIIRRAMLPAGAAPQHKEPVDIGIEAGRIVAVEPNLAAGAREEIDAAGSLVTPPFVDP
CCHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCC
HFHMDATLSYGLPRVNASGTLLEGIALWGELKPDLTQEALIERALQYCDWAVARGLLAIR
CCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVDVCDPRLLAVEALVEVKRRVAPYLDLQLVAFPQDGVLRSAGAFENLKRSIAMGVDVV
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCHHHH
GGIPHFERTMADGAQSVRLLCEYAAEQGLRVDMHCDESDDPMSRHIETLAAETHRLGLQG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
RVTGSHLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCHHHCCCHHHHH
MMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGVDGMRACFDAVTVNAARI
HHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHE
LGLEGYGIAPGCAANLVLLDARDPVEAIRLRAARLAVVSRGKVVSRAPAARAALSLEGRP
EECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHEEEECCCC
SEVDFKLHRG
CCCCEEEECC
>Mature Secondary Structure
MDLIIRRAMLPAGAAPQHKEPVDIGIEAGRIVAVEPNLAAGAREEIDAAGSLVTPPFVDP
CCHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCC
HFHMDATLSYGLPRVNASGTLLEGIALWGELKPDLTQEALIERALQYCDWAVARGLLAIR
CCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVDVCDPRLLAVEALVEVKRRVAPYLDLQLVAFPQDGVLRSAGAFENLKRSIAMGVDVV
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHCHHHH
GGIPHFERTMADGAQSVRLLCEYAAEQGLRVDMHCDESDDPMSRHIETLAAETHRLGLQG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
RVTGSHLTSMHSMDNYYVSKLLPLMREAGVAAIANPLINITLQGRSDTYPKRRGMTRVPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCCHHHCCCHHHHH
MMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMTGVDGMRACFDAVTVNAARI
HHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHE
LGLEGYGIAPGCAANLVLLDARDPVEAIRLRAARLAVVSRGKVVSRAPAARAALSLEGRP
EECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHEEEECCCC
SEVDFKLHRG
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]