Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is fdx [H]

Identifier: 91784243

GI number: 91784243

Start: 3190748

End: 3191089

Strand: Reverse

Name: fdx [H]

Synonym: Bxe_A1558

Alternate gene names: 91784243

Gene position: 3191089-3190748 (Counterclockwise)

Preceding gene: 91784244

Following gene: 91784242

Centisome position: 65.18

GC content: 61.7

Gene sequence:

>342_bases
ATGCCTCAAATCGTTGTGCTGCCTCACGTCGAACTGTGCCCGGAAGGCGCGGTGATCGACGCCGTGCCCGGCAAGAGCAT
CTGCGACAGCCTGCTCGAACACGGCATTGAAATCGAGCACGCGTGCGAGAAGTCCTGCGCGTGCACGACCTGTCACGTGA
TCGTGCGTGAGGGTTTCGCCGCCTTGACGCCGTCGGAGGAAGACGAGGACGATCTGCTGGACAAGGCGTGGGGCCTCGAA
CCGACCTCGCGCCTGTCATGCCAGGCGCTGGTGCCGGCTGAGCAGGATCTGGTTGTCGAAATCCCTCGCTACTCGATCAA
TCACGCGAAGGAAAACCACTAA

Upstream 100 bases:

>100_bases
CCGAACCGCGCCGCGTGGACTTAAAAAGTCCTCGCGGCGCCAGTAAAATGGCACGGAGCCTGTTTGCGGCCGCCGTGCCA
CAGACCCAAACGGAAAATGT

Downstream 100 bases:

>100_bases
CAGGAGGATGCAGCCATGAAGTGGACCGATACGCAAGACATCGCGATGGCCCTGACTGACAAGCACCAGGACGTCGATCC
GCAGCAGGTGCGCTTCACCG

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLE
PTSRLSCQALVPAEQDLVVEIPRYSINHAKENH

Sequences:

>Translated_113_residues
MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLE
PTSRLSCQALVPAEQDLVVEIPRYSINHAKENH
>Mature_112_residues
PQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLEP
TSRLSCQALVPAEQDLVVEIPRYSINHAKENH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=92, Percent_Identity=40.2173913043478, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1788874, Length=112, Percent_Identity=70.5357142857143, Blast_Score=163, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=44.1860465116279, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24661503, Length=113, Percent_Identity=37.1681415929204, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12326; Mature: 12195

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFA
CCCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCE
ALTPSEEDEDDLLDKAWGLEPTSRLSCQALVPAEQDLVVEIPRYSINHAKENH
ECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFA
CCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCE
ALTPSEEDEDDLLDKAWGLEPTSRLSCQALVPAEQDLVVEIPRYSINHAKENH
ECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809750; 10984043 [H]