| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fdx [H]
Identifier: 91784243
GI number: 91784243
Start: 3190748
End: 3191089
Strand: Reverse
Name: fdx [H]
Synonym: Bxe_A1558
Alternate gene names: 91784243
Gene position: 3191089-3190748 (Counterclockwise)
Preceding gene: 91784244
Following gene: 91784242
Centisome position: 65.18
GC content: 61.7
Gene sequence:
>342_bases ATGCCTCAAATCGTTGTGCTGCCTCACGTCGAACTGTGCCCGGAAGGCGCGGTGATCGACGCCGTGCCCGGCAAGAGCAT CTGCGACAGCCTGCTCGAACACGGCATTGAAATCGAGCACGCGTGCGAGAAGTCCTGCGCGTGCACGACCTGTCACGTGA TCGTGCGTGAGGGTTTCGCCGCCTTGACGCCGTCGGAGGAAGACGAGGACGATCTGCTGGACAAGGCGTGGGGCCTCGAA CCGACCTCGCGCCTGTCATGCCAGGCGCTGGTGCCGGCTGAGCAGGATCTGGTTGTCGAAATCCCTCGCTACTCGATCAA TCACGCGAAGGAAAACCACTAA
Upstream 100 bases:
>100_bases CCGAACCGCGCCGCGTGGACTTAAAAAGTCCTCGCGGCGCCAGTAAAATGGCACGGAGCCTGTTTGCGGCCGCCGTGCCA CAGACCCAAACGGAAAATGT
Downstream 100 bases:
>100_bases CAGGAGGATGCAGCCATGAAGTGGACCGATACGCAAGACATCGCGATGGCCCTGACTGACAAGCACCAGGACGTCGATCC GCAGCAGGTGCGCTTCACCG
Product: ferredoxin, 2Fe-2S type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLE PTSRLSCQALVPAEQDLVVEIPRYSINHAKENH
Sequences:
>Translated_113_residues MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLE PTSRLSCQALVPAEQDLVVEIPRYSINHAKENH >Mature_112_residues PQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFAALTPSEEDEDDLLDKAWGLEP TSRLSCQALVPAEQDLVVEIPRYSINHAKENH
Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI72534754, Length=92, Percent_Identity=40.2173913043478, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1788874, Length=112, Percent_Identity=70.5357142857143, Blast_Score=163, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6325004, Length=86, Percent_Identity=44.1860465116279, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI24661503, Length=113, Percent_Identity=37.1681415929204, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001055 - InterPro: IPR018298 - InterPro: IPR012675 - InterPro: IPR011536 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2 [H]
EC number: NA
Molecular weight: Translated: 12326; Mature: 12195
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFA CCCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCE ALTPSEEDEDDLLDKAWGLEPTSRLSCQALVPAEQDLVVEIPRYSINHAKENH ECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure PQIVVLPHVELCPEGAVIDAVPGKSICDSLLEHGIEIEHACEKSCACTTCHVIVREGFA CCEEECCCCEECCCCCEEECCCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCE ALTPSEEDEDDLLDKAWGLEPTSRLSCQALVPAEQDLVVEIPRYSINHAKENH ECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]