| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784168
Identifier: 91784168
GI number: 91784168
Start: 3106593
End: 3106982
Strand: Reverse
Name: 91784168
Synonym: Bxe_A1633
Alternate gene names: NA
Gene position: 3106982-3106593 (Counterclockwise)
Preceding gene: 91784169
Following gene: 91784167
Centisome position: 63.46
GC content: 52.05
Gene sequence:
>390_bases GTGGGGTTGGCAGGTATCGCAGAATTCAACCATGCTTTCACAGGTGGCGGAGCAGGCAAAGCAACCGTATCAGACCTGTT TTTTACGCATGAGTTTGATCGAGCCAGTCCGAACCTGGCGAAATACTGCTTCACAGGCAAACGTGTCGACAAGGCGCTGC TGACAATGCGCAAGGCGGGTGGCATACCTCACGAATTTTCGCGAATCACGATGTATGACGTGATAATCACGCACGTTGCG CCGCTCGCGAACGAAACAACTTGCCACGAAAGTGTCCGCCTATCCTTTTCGACCATGAAGCACGAATATATCGTTCAGAA TCCTCTCGGCGGCAGCGGTGGGACGGTGACGGCCATGATGTATATCAAAGAAAATAGCACCGTCAGATAG
Upstream 100 bases:
>100_bases AAGAGGGAGGTGGAGTGGCGCAGGATATTTTTATTAAAATAAATGGCATTGATGGTGAATCTCAGGATGCCGCGCATTTG AATGAAATTGATGTAATTTC
Downstream 100 bases:
>100_bases AGCAACGCTGCTGTAAGACGACATTGAAGAGGCTGTCCATCTGGACGGGGCGCGCCGAATAACGATGGCCTGATGGCGGC GGCAACCCTGCGTACCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin-Coregulated Protein; Hcp-Related Protein; Hcp Family T6SS H; Cytoplasmic Protein; Hcp1 Family Type VI Secretion System Effector; Cytoplasmic Protein SciM
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVA PLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR
Sequences:
>Translated_129_residues MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVA PLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR >Mature_128_residues GLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVAP LANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14046; Mature: 13915
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHC GIPHEFSRITMYDVIITHVAPLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMM CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE YIKENSTVR EEECCCCCC >Mature Secondary Structure GLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHC GIPHEFSRITMYDVIITHVAPLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMM CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE YIKENSTVR EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA