Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91784168

Identifier: 91784168

GI number: 91784168

Start: 3106593

End: 3106982

Strand: Reverse

Name: 91784168

Synonym: Bxe_A1633

Alternate gene names: NA

Gene position: 3106982-3106593 (Counterclockwise)

Preceding gene: 91784169

Following gene: 91784167

Centisome position: 63.46

GC content: 52.05

Gene sequence:

>390_bases
GTGGGGTTGGCAGGTATCGCAGAATTCAACCATGCTTTCACAGGTGGCGGAGCAGGCAAAGCAACCGTATCAGACCTGTT
TTTTACGCATGAGTTTGATCGAGCCAGTCCGAACCTGGCGAAATACTGCTTCACAGGCAAACGTGTCGACAAGGCGCTGC
TGACAATGCGCAAGGCGGGTGGCATACCTCACGAATTTTCGCGAATCACGATGTATGACGTGATAATCACGCACGTTGCG
CCGCTCGCGAACGAAACAACTTGCCACGAAAGTGTCCGCCTATCCTTTTCGACCATGAAGCACGAATATATCGTTCAGAA
TCCTCTCGGCGGCAGCGGTGGGACGGTGACGGCCATGATGTATATCAAAGAAAATAGCACCGTCAGATAG

Upstream 100 bases:

>100_bases
AAGAGGGAGGTGGAGTGGCGCAGGATATTTTTATTAAAATAAATGGCATTGATGGTGAATCTCAGGATGCCGCGCATTTG
AATGAAATTGATGTAATTTC

Downstream 100 bases:

>100_bases
AGCAACGCTGCTGTAAGACGACATTGAAGAGGCTGTCCATCTGGACGGGGCGCGCCGAATAACGATGGCCTGATGGCGGC
GGCAACCCTGCGTACCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin-Coregulated Protein; Hcp-Related Protein; Hcp Family T6SS H; Cytoplasmic Protein; Hcp1 Family Type VI Secretion System Effector; Cytoplasmic Protein SciM

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVA
PLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR

Sequences:

>Translated_129_residues
MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVA
PLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR
>Mature_128_residues
GLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAGGIPHEFSRITMYDVIITHVAP
LANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMMYIKENSTVR

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14046; Mature: 13915

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHC
GIPHEFSRITMYDVIITHVAPLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMM
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE
YIKENSTVR
EEECCCCCC
>Mature Secondary Structure 
GLAGIAEFNHAFTGGGAGKATVSDLFFTHEFDRASPNLAKYCFTGKRVDKALLTMRKAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHC
GIPHEFSRITMYDVIITHVAPLANETTCHESVRLSFSTMKHEYIVQNPLGGSGGTVTAMM
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEE
YIKENSTVR
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA