Click here to switch to the map view.

The map label for this gene is yejB [H]

Identifier: 91784164

GI number: 91784164

Start: 3101795

End: 3102832

Strand: Reverse

Name: yejB [H]

Synonym: Bxe_A1637

Alternate gene names: 91784164

Gene position: 3102832-3101795 (Counterclockwise)

Preceding gene: 91784165

Following gene: 91784163

Centisome position: 63.38

GC content: 60.31

Gene sequence:

>1038_bases
ATGTGGAGCTACATCCTCAAACGCCTGCTGCTCATGATCCCGACCCTGCTCGGCGTGCTCACGCTGACCTTCGCCGTGAT
CCAGTTCGTCCCCGGTGGCCCGGTCGAGCAGATGCAGCACGAGTTGCGCAAAGGCGCGGAGAACGGCGCGCCGTTCGGTC
TGCGCGCGCATAGCGGCGTCGACGCGCAGCAGATCGCACAACTGAAAGCGCTCTACGGTTTCGACAAACCCCCGCTCGAG
CGTTACGTGCTGATGCTCAAGCGCTTCTCGACGTTCGATCTCGGCCAGAGCTATTTCCGCCATCAAAGCGTGTGGTCGCT
GATCGTCTCCAAGCTGCCGGTGTCGATCAGCATCGGCTTGTGGACGTTCTTTCTGACGTATCTGATATCGGTGCCGCTCG
GCATTGCGAAGGCGATCCGCAACGGCTCGCGTTTCGACGTCGCAACGAGCCTCGTGGTGCTGATCGGCTATGCGATTCCG
GGCTTCGTGCTGGGCGTGCTGCTGCTCGTGGTGTTCGGTGGCGGCACGTTCCTGCAACTCTTTCCGCTGCGCAATCTCAC
GTCGGACAACTGGGCGCAATTGAGTGTCGCCGGCAAGGTGCTCGACTATCTGTGGCATATCGCGTTGCCGATCACGGCCT
CGGTCGTGGGCAGTTTCGCGGTGGTCACCATGCTGACGAAAAATGCTTTTCTCGACGAGATCCGCAAACAATACGTGCTG
ACCGCGCGCGCCAAAGGTCTGTCCGAAAAGCGCGTGCTGTGGAAGCACGTGTTCCGCAATGCGCTGTTGCCGCTGATCGT
CGGTTTTCCGGCTGCGTTCATCGGCGCGTTCTTTACCGGCAGTCTGCTGATCGAAACGCTGTTTTCGCTCGACGGCCTCG
GGTTGCTGTCGTACGAATCGGTGGTGCGGCGCGACTATCCGGTCGTGCTCGGCACGCTGTATCTGTTCACGCTGATCGGT
CTGGCGACCAAGCTGATTTCCGATCTTTGCTATGTGTGGGTCGATCCCCGCATCCAATTCGAACAACTGGAGCGCTGA

Upstream 100 bases:

>100_bases
TCGACGTGGTGGTTCGCGCAGCCACAAGCGCAGCCGCAAGCCCAGGCCCAGCCGCGCTAACGCGTCATTCATTCACCGCC
TTCGCACCGGAACCGCCGCC

Downstream 100 bases:

>100_bases
TGAATCGAGCCCGTCTTTCCGCCGATGCGTCGGCGCGCGCCGAAACCGCGCGCGCGTTCGTGTCGCCTTCGCCCGCGCGC
CGTGTCTGGCAGCGCTTTCG

Product: ABC peptide transporter, inner membrane subunit

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MWSYILKRLLLMIPTLLGVLTLTFAVIQFVPGGPVEQMQHELRKGAENGAPFGLRAHSGVDAQQIAQLKALYGFDKPPLE
RYVLMLKRFSTFDLGQSYFRHQSVWSLIVSKLPVSISIGLWTFFLTYLISVPLGIAKAIRNGSRFDVATSLVVLIGYAIP
GFVLGVLLLVVFGGGTFLQLFPLRNLTSDNWAQLSVAGKVLDYLWHIALPITASVVGSFAVVTMLTKNAFLDEIRKQYVL
TARAKGLSEKRVLWKHVFRNALLPLIVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVVRRDYPVVLGTLYLFTLIG
LATKLISDLCYVWVDPRIQFEQLER

Sequences:

>Translated_345_residues
MWSYILKRLLLMIPTLLGVLTLTFAVIQFVPGGPVEQMQHELRKGAENGAPFGLRAHSGVDAQQIAQLKALYGFDKPPLE
RYVLMLKRFSTFDLGQSYFRHQSVWSLIVSKLPVSISIGLWTFFLTYLISVPLGIAKAIRNGSRFDVATSLVVLIGYAIP
GFVLGVLLLVVFGGGTFLQLFPLRNLTSDNWAQLSVAGKVLDYLWHIALPITASVVGSFAVVTMLTKNAFLDEIRKQYVL
TARAKGLSEKRVLWKHVFRNALLPLIVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVVRRDYPVVLGTLYLFTLIG
LATKLISDLCYVWVDPRIQFEQLER
>Mature_345_residues
MWSYILKRLLLMIPTLLGVLTLTFAVIQFVPGGPVEQMQHELRKGAENGAPFGLRAHSGVDAQQIAQLKALYGFDKPPLE
RYVLMLKRFSTFDLGQSYFRHQSVWSLIVSKLPVSISIGLWTFFLTYLISVPLGIAKAIRNGSRFDVATSLVVLIGYAIP
GFVLGVLLLVVFGGGTFLQLFPLRNLTSDNWAQLSVAGKVLDYLWHIALPITASVVGSFAVVTMLTKNAFLDEIRKQYVL
TARAKGLSEKRVLWKHVFRNALLPLIVGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYESVVRRDYPVVLGTLYLFTLIG
LATKLISDLCYVWVDPRIQFEQLER

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=53.5911602209945, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1789965, Length=360, Percent_Identity=31.3888888888889, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787497, Length=341, Percent_Identity=28.4457478005865, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787053, Length=341, Percent_Identity=28.7390029325513, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1789888, Length=342, Percent_Identity=26.9005847953216, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1787761, Length=352, Percent_Identity=25.5681818181818, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787550, Length=259, Percent_Identity=22.7799227799228, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38434; Mature: 38434

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]