| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is gltX [H]
Identifier: 91784159
GI number: 91784159
Start: 3095331
End: 3096740
Strand: Reverse
Name: gltX [H]
Synonym: Bxe_A1642
Alternate gene names: 91784159
Gene position: 3096740-3095331 (Counterclockwise)
Preceding gene: 91784161
Following gene: 91784158
Centisome position: 63.25
GC content: 64.61
Gene sequence:
>1410_bases ATGACCACCTCTGTTCGCACCCGTTTCGCACCGAGTCCCACCGGCTTCATCCACCTCGGCAACATTCGCTCCGCGCTTTA TCCGTGGGCGTTCGCGCGCAAGATGAAAGGGACCTTCGTGCTGCGGATCGAGGACACCGACGTCGAGCGCTCCACGAGCG AATCCGTCGACGCCATTCTCGAAGGCATGGCGTGGCTCGGCCTCGATTTCGACGAAGGTCCGTTCTACCAGATGCAGCGC ATGGACCGCTACCGCGAAGTGCTCAAGCAGATGCAGGACGAGGGGCTGGTGTACCTGTGCTACATGTCGACGGAAGAACT GGACGCGTTGCGCGAACGCCAGCGCGAAGCCGGCGAAAAGCCGCGCTACGACGGCACGTGGCGCCCGGAGCCGGGCAAGG TGCTGCCGGAACCGCCTGCGGGCGTACAGCCGGTGCTGCGCTTCCGCAACCCGCTCAACGGCGTGGTGGCATGGGACGAC GCCGTAAAGGGCCGCATCGAGATTTCGAACGAGGAACTCGACGACCTCGTGATCGCGCGCCCGGACGGCACGCCGACCTA CAACTTCTGCGTGGTGGTCGACGATCTGGACATGCGTATCACGCACGTGATTCGCGGCGACGATCACGTCAACAACACGC CGCGCCAGATCAACATTCTGCGCGCGCTCGGCGGCGAGCCGCCCGTCTATGCGCACCTGCCCACCGTGCTGAACGAACAG GGCGAGAAGATGAGCAAGCGTCACGGCGCAATGAGCGTGATGGGTTATCGCGACGCCGGTTACCTGCCGGAGGCGGTGGT CAACTATCTGGCGCGTCTGGGCTGGTCGCATGGCGACGCGGAAATCTTCTCTCGTGAACAGTTCGTCGAGTGGTTCGATC TGGAGCATCTGGGCAAGTCCCCGGCCCAATATGACCACGACAAGCTGAACTGGCTGAATGCGCACTACATCAAGGAAGCC GGCAACGTGCGCCTCGCGGAGTTGGCGCGGCCCTTCTTCGCTGGGCTCGGTATCGACGAAGCCATGCTTGCCCAGGGCGC CGATCTGACCGCCGTGGTGGGCTTGCTGAAGGATCGCGCGTCGACGGTAAAGGAAATCGCAGAGAATGCCGCGATGTTCT ATCGCGCGCCGGCGCCGGACGCCGAGTCGCTCACGCAGCATGTGACCGACGCGGTGCGGCCGGCGCTCGCCGATCTGGCG GCCGCGCTCAAGGCAGTGGAGTGGACCAGGGAAGCCATCGCGGCCGCGTTGAAGGCAACGCTCGGCGCGCACAAGCTGAA GATGCCGCAGCTTGCGATGCCGGTGCGTCTGCTGGTGGCGGGCACCACGCACACGCCGTCGATCGACAGCGTGCTGATGC TGTTCGGGCGCGATGTGGTGGTGAGCCGTATCGAAAAAGCGCTGGCCTGA
Upstream 100 bases:
>100_bases TGCCTGCTGCATGGGCGCGGTCCGCTGCCGCGCTTCACGGGCTGCTTCACGGGCTATGTTCCACCCGGGCGCCGGCGCCT GTCTTTCCGAGTAACCGCTA
Downstream 100 bases:
>100_bases GCGCGTTCGGGCGCGCCTTGAGCGGGTTTGCATGCGACTTGCGAAAAAAGTCGCATGCAATTGCTCAAAGGGTATTTACA AAGCGCAAATTGGCCTCTAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAILEGMAWLGLDFDEGPFYQMQR MDRYREVLKQMQDEGLVYLCYMSTEELDALRERQREAGEKPRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLNGVVAWDD AVKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHDKLNWLNAHYIKEA GNVRLAELARPFFAGLGIDEAMLAQGADLTAVVGLLKDRASTVKEIAENAAMFYRAPAPDAESLTQHVTDAVRPALADLA AALKAVEWTREAIAAALKATLGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVSRIEKALA
Sequences:
>Translated_469_residues MTTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAILEGMAWLGLDFDEGPFYQMQR MDRYREVLKQMQDEGLVYLCYMSTEELDALRERQREAGEKPRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLNGVVAWDD AVKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHDKLNWLNAHYIKEA GNVRLAELARPFFAGLGIDEAMLAQGADLTAVVGLLKDRASTVKEIAENAAMFYRAPAPDAESLTQHVTDAVRPALADLA AALKAVEWTREAIAAALKATLGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVSRIEKALA >Mature_468_residues TTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAILEGMAWLGLDFDEGPFYQMQRM DRYREVLKQMQDEGLVYLCYMSTEELDALRERQREAGEKPRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLNGVVAWDDA VKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQG EKMSKRHGAMSVMGYRDAGYLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHDKLNWLNAHYIKEAG NVRLAELARPFFAGLGIDEAMLAQGADLTAVVGLLKDRASTVKEIAENAAMFYRAPAPDAESLTQHVTDAVRPALADLAA ALKAVEWTREAIAAALKATLGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVSRIEKALA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=332, Percent_Identity=34.6385542168675, Blast_Score=195, Evalue=7e-50, Organism=Escherichia coli, GI1788743, Length=467, Percent_Identity=49.8929336188437, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=36.3265306122449, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1786895, Length=121, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71993394, Length=482, Percent_Identity=29.045643153527, Blast_Score=184, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6324540, Length=332, Percent_Identity=35.5421686746988, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.6094420600858, Blast_Score=73, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=106, Percent_Identity=29.2452830188679, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665321, Length=500, Percent_Identity=28.4, Blast_Score=217, Evalue=1e-56,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 52305; Mature: 52174
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAIL CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH EGMAWLGLDFDEGPFYQMQRMDRYREVLKQMQDEGLVYLCYMSTEELDALRERQREAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLNGVVAWDDAVKGRIEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQ CCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHDKLNWLNAHYIKEAGNVRLAELARPFFAGLGIDEAMLAQGADLTAVVGLLKDRA CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH STVKEIAENAAMFYRAPAPDAESLTQHVTDAVRPALADLAAALKAVEWTREAIAAALKAT HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVSRIEKALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAIL CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH EGMAWLGLDFDEGPFYQMQRMDRYREVLKQMQDEGLVYLCYMSTEELDALRERQREAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLNGVVAWDDAVKGRIEISNEELDDLVIAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEEEC PDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQ CCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHDKLNWLNAHYIKEAGNVRLAELARPFFAGLGIDEAMLAQGADLTAVVGLLKDRA CCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH STVKEIAENAAMFYRAPAPDAESLTQHVTDAVRPALADLAAALKAVEWTREAIAAALKAT HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVSRIEKALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA