| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784151
Identifier: 91784151
GI number: 91784151
Start: 3087146
End: 3087580
Strand: Reverse
Name: 91784151
Synonym: Bxe_A1650
Alternate gene names: NA
Gene position: 3087580-3087146 (Counterclockwise)
Preceding gene: 91784152
Following gene: 91784147
Centisome position: 63.07
GC content: 64.37
Gene sequence:
>435_bases ATGTTCAGGCACATTCTGGTTCCGACGGACGGTTCAGACCTGTCTCGCAAAGCGATCGAGGGCGCCATCGATCTCGCGCA AGCCGTCGACGCGCGCGTGACCGCTTATGCATGTCTGCCGCAATATCCGTACTCGCCGTTCTCCGACGTGGTGGTCGAAC CGCCGTCCGAATTCCTGCAGCGCAGCGAACGCGAAGCGCGTGTGCATCTGCGTGAAGTGGAAATGGCGGCGCGCCGTGTC GGCGTCGCGGTTCATAGCCGGACCAGCGTGCACCCGGCGCCGTATCTCGGCATCATCGAGGCGGCCGAGCAGGGCGGCTG CGACGTGATCTTCATGGCGTCGCATGGGCGCCGCGGTCTGGGCAGCCTGCTGATCGGCAGCGAAACGCAGCGGGTGCTCA CGCATACGAAGATTCCGGTGATCGTGTATCGCTGA
Upstream 100 bases:
>100_bases CGGCCCGATTCCGCGACCTACAATCGATTGAAGCGGCTTGTACGCCGAGCCTCGTTGGACGCTGACGCCGCGCTGCGCGC AGCCGGCGACGGAGGGCATC
Downstream 100 bases:
>100_bases ATTGAAGCCGGCAAGATTGAGGCGGACAAGATTGAAGCCGACAAAAAAACGCGCCGGCGGTGAGGCCGGCGCGCGCTGTG TTCGCCGCACAATGCGTTGT
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFRHILVPTDGSDLSRKAIEGAIDLAQAVDARVTAYACLPQYPYSPFSDVVVEPPSEFLQRSEREARVHLREVEMAARRV GVAVHSRTSVHPAPYLGIIEAAEQGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Sequences:
>Translated_144_residues MFRHILVPTDGSDLSRKAIEGAIDLAQAVDARVTAYACLPQYPYSPFSDVVVEPPSEFLQRSEREARVHLREVEMAARRV GVAVHSRTSVHPAPYLGIIEAAEQGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR >Mature_144_residues MFRHILVPTDGSDLSRKAIEGAIDLAQAVDARVTAYACLPQYPYSPFSDVVVEPPSEFLQRSEREARVHLREVEMAARRV GVAVHSRTSVHPAPYLGIIEAAEQGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15835; Mature: 15835
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRHILVPTDGSDLSRKAIEGAIDLAQAVDARVTAYACLPQYPYSPFSDVVVEPPSEFLQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCHHHHH RSEREARVHLREVEMAARRVGVAVHSRTSVHPAPYLGIIEAAEQGGCDVIFMASHGRRGL CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCCHHHHHHCCCCEEEEC >Mature Secondary Structure MFRHILVPTDGSDLSRKAIEGAIDLAQAVDARVTAYACLPQYPYSPFSDVVVEPPSEFLQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCHHHHH RSEREARVHLREVEMAARRVGVAVHSRTSVHPAPYLGIIEAAEQGGCDVIFMASHGRRGL CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCCHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]