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The map label for this gene is rnfH

Identifier: 91784097

GI number: 91784097

Start: 3024050

End: 3024382

Strand: Reverse

Name: rnfH

Synonym: Bxe_A1704

Alternate gene names: 91784097

Gene position: 3024382-3024050 (Counterclockwise)

Preceding gene: 91784098

Following gene: 91784095

Centisome position: 61.77

GC content: 65.47

Gene sequence:

>333_bases
ATGAGCGCGCGCTTGTCGATTGAAGTCTGCTACGCGTCGGCCGGCGAGCAGGCGCTGATCGCCGTGGAATTGCCGGAAGG
CGCCACGCTGCGGCAGGCGCTGGACGCGAGCGGCATCTTGCGGCGTTTCCCGCAGATCGATCTGGACACGCAGAAGGTGG
GTGTGTTCGGCAAGCTCAAGCCGCTCGACGCGGTGCTGAACGACCACGATCGGGTGGAGATTTACCGGCCGCTGCTGGTC
GATCCCAAGGTATCGCGCCAGCGCCGCGTCGAGAAAACCCGCAAGGCGGGCTCGATCGAAGGGCGTCGCTGGCAGAACAA
GGACTCGCGGTAA

Upstream 100 bases:

>100_bases
ACATCATTCTCGAGAAGATCATTGGGCCGGTGTTCAATCACATTGCCAACACCTTCGTCGAGTCGTTCGTGAAGCGCGCC
GACCAGCGCTACGGTAAGGC

Downstream 100 bases:

>100_bases
GCGGGTTACGGCCAGCTTGGGCGGGAAGCCGCCGCGAGGTGCTGCCGCGAGGCGCGGTGAAGCGGTAGGGAAGCCGCCGT
CAGGCAAGCCCGGCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSARLSIEVCYASAGEQALIAVELPEGATLRQALDASGILRRFPQIDLDTQKVGVFGKLKPLDAVLNDHDRVEIYRPLLV
DPKVSRQRRVEKTRKAGSIEGRRWQNKDSR

Sequences:

>Translated_110_residues
MSARLSIEVCYASAGEQALIAVELPEGATLRQALDASGILRRFPQIDLDTQKVGVFGKLKPLDAVLNDHDRVEIYRPLLV
DPKVSRQRRVEKTRKAGSIEGRRWQNKDSR
>Mature_109_residues
SARLSIEVCYASAGEQALIAVELPEGATLRQALDASGILRRFPQIDLDTQKVGVFGKLKPLDAVLNDHDRVEIYRPLLVD
PKVSRQRRVEKTRKAGSIEGRRWQNKDSR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=93, Percent_Identity=45.1612903225806, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_BURXL (Q13XD8)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_559303.1
- ProteinModelPortal:   Q13XD8
- SMR:   Q13XD8
- GeneID:   4004995
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A1704
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- ProtClustDB:   CLSK930841
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 12383; Mature: 12252

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLSIEVCYASAGEQALIAVELPEGATLRQALDASGILRRFPQIDLDTQKVGVFGKLK
CCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCC
PLDAVLNDHDRVEIYRPLLVDPKVSRQRRVEKTRKAGSIEGRRWQNKDSR
HHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SARLSIEVCYASAGEQALIAVELPEGATLRQALDASGILRRFPQIDLDTQKVGVFGKLK
CCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCC
PLDAVLNDHDRVEIYRPLLVDPKVSRQRRVEKTRKAGSIEGRRWQNKDSR
HHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA