| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is iciA [H]
Identifier: 91784058
GI number: 91784058
Start: 2980137
End: 2981090
Strand: Reverse
Name: iciA [H]
Synonym: Bxe_A1745
Alternate gene names: 91784058
Gene position: 2981090-2980137 (Counterclockwise)
Preceding gene: 91784059
Following gene: 91784054
Centisome position: 60.89
GC content: 56.92
Gene sequence:
>954_bases ATGAATTTTGATCGACAACAGTTGGAGGCGTTTTCCGCCATTGTGGAGACGCGGCATTTCGGACGTGCCGCCAAGTTGTT GAGTATCACTCGTGGTGCGGTGTCTCTTCGGCTCAAGGCACTTGAGGAGGAGTTCGGTACTCCACTGGTTGTGCGAGATG GAAATGTCCCCACGCCAGCAGGCGAGGTCCTGCTGAGGCATATCCGTGTGCTCAAGATGCTCGAGGCGGAAACGCAGCAG CAGATTAAACCAACGGACGGCATGCACCCACGCGTGGCTATCGCTGTGAATGCGGATTCCCTCGCAACGTGGTTCGAGGC TGTCGCCTGGGAAATTGCGGAAAGAAACGTAGCTCTCGAACTGATCGTTGACGATCAGGATTACACCCTACCACTACTGA CCAAGGGAGAGGCGATGGGCTGTGTTTCGACCTCCAGCAATCCCCCGACGGGTTTTCTCGCTGAACCCATTGGCATGATG GAGTATGAGTGTGTCGCGAACGTGGAGTTCGCCGCAAAGTTCTTCCCGCAAGGCCTGGGGTTGCATGGCGTCCTTGCCGC GCCTGCGGTGCTCTACAACCGGAAGGATGGATTGCACACGCTGTTTCTCGAGCGACTTCTGGACCTTGAGGTACGGAACT ACGCGACGCATTACTTTCCGTCGCCGTCGGCATTGCTGGCTGCGATCGAGAAGGGGATAGGGTACGGACTCGTTCCCTGT CTGCAAGCCAGCTCTCTGATCGAAGCGGGCAAGCTGGTGCGCCTCGCGCCTCAGCATAAGGTGGAAGTCAACCTCTATTG GCATCATTGGGAAACTGCCCCGTCGAATGCCCAGGCGATTAGCGAACTTGTGGTGCGTCATGCGCACCGGGCGCTCATTC AGGCGGGTGATCATGCTATGTCGTTCAGCGATGGTGATGAGTCTGTTGACACTGATCATCCCAGTGAGCGTTGA
Upstream 100 bases:
>100_bases TCCGCACCGCGTTGGCCAAACGCCTCGCCGTGCTGGAGCCGCAGAAGACCGTCGCGCTTTCCGTGATGGAGCGCGCATAA CGAGCGCGCAGAATCTGGTC
Downstream 100 bases:
>100_bases TGCGGTTCTGCCGGAGTTAGGCACTGAAATCTTCTCTGGCTGATTGGGGCGCGAAATCGCAGGGATGCAGCGAACGCAAG GCCATGCCGGTATTAGCGGC
Product: chromosome replication initiation inhibitor protein
Products: NA
Alternate protein names: OriC replication inhibitor [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNFDRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNVPTPAGEVLLRHIRVLKMLEAETQQ QIKPTDGMHPRVAIAVNADSLATWFEAVAWEIAERNVALELIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMM EYECVANVEFAAKFFPQGLGLHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPC LQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQAGDHAMSFSDGDESVDTDHPSER
Sequences:
>Translated_317_residues MNFDRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNVPTPAGEVLLRHIRVLKMLEAETQQ QIKPTDGMHPRVAIAVNADSLATWFEAVAWEIAERNVALELIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMM EYECVANVEFAAKFFPQGLGLHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPC LQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQAGDHAMSFSDGDESVDTDHPSER >Mature_317_residues MNFDRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNVPTPAGEVLLRHIRVLKMLEAETQQ QIKPTDGMHPRVAIAVNADSLATWFEAVAWEIAERNVALELIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMM EYECVANVEFAAKFFPQGLGLHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPC LQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQAGDHAMSFSDGDESVDTDHPSER
Specific function: Specific inhibitor of chromosomal initiation of replication in vitro. Binds the three 13-mers in the origin (oriC) to block initiation of replication [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789283, Length=295, Percent_Identity=33.2203389830508, Blast_Score=150, Evalue=8e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR017685 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 34877; Mature: 34877
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNVPTPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH GEVLLRHIRVLKMLEAETQQQIKPTDGMHPRVAIAVNADSLATWFEAVAWEIAERNVALE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEEE LIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMMEYECVANVEFAAKFFPQGLG EEECCCCCEEEEEECCCCCEEEECCCCCCCCCHHCCCCCHHHHHHCCHHHHHHHCCCCCC LHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPC CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH LQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQAGDHAM HHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC SFSDGDESVDTDHPSER CCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFDRQQLEAFSAIVETRHFGRAAKLLSITRGAVSLRLKALEEEFGTPLVVRDGNVPTPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH GEVLLRHIRVLKMLEAETQQQIKPTDGMHPRVAIAVNADSLATWFEAVAWEIAERNVALE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEEE LIVDDQDYTLPLLTKGEAMGCVSTSSNPPTGFLAEPIGMMEYECVANVEFAAKFFPQGLG EEECCCCCEEEEEECCCCCEEEECCCCCCCCCHHCCCCCHHHHHHCCHHHHHHHCCCCCC LHGVLAAPAVLYNRKDGLHTLFLERLLDLEVRNYATHYFPSPSALLAAIEKGIGYGLVPC CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH LQASSLIEAGKLVRLAPQHKVEVNLYWHHWETAPSNAQAISELVVRHAHRALIQAGDHAM HHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC SFSDGDESVDTDHPSER CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9286976 [H]