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The map label for this gene is ytfH [H]

Identifier: 91784027

GI number: 91784027

Start: 2950248

End: 2950652

Strand: Reverse

Name: ytfH [H]

Synonym: Bxe_A1776

Alternate gene names: 91784027

Gene position: 2950652-2950248 (Counterclockwise)

Preceding gene: 91784030

Following gene: 91784026

Centisome position: 60.27

GC content: 61.73

Gene sequence:

>405_bases
ATGGATATGCCTGCCTCACCGGGCGTCAGTACTCAATGCCATAAGGTTGGCAAGGTGCTCGCCATCGTTGGCGACAAATG
GACGGTCATGATTGTCAGGGTACTGATTGATCGGCCACGCCGCTTCAACGAGATCAAACGGACCATCGGCGGGATCTCGC
AGCAGATGCTTACGCGTACCCTGAAGGCACTCGAGCGCGACGGCATGGTGAGCCGCACGGTCTACCCGACGGTGCCTCCG
CAGGTCGAATATGCCCTGACGCCGCTCGGACAATCCCTCGCCGTCCCGGTTCGTGCACTGGGTGCGTGGGCGGGAGAGCA
TCTCGACGAGATCGAGAGCAACCAGGCACGCTATGATCAGGACAAACATGCTCGCGCCACTCGACGCGGGACCGGGCAGG
CCTGA

Upstream 100 bases:

>100_bases
GCAGGTTCACTTTTGGCCTCTGGTCTGGATTTGTGACCAGCACTATGCTATGCAAGTCGAGGCGATCCGCCAAGAACGCA
TATTTTTAGGACCAGGTCAC

Downstream 100 bases:

>100_bases
CGCCCGCAGGCGAAAGAGCAGCTCGCGTCGGTGATTAGCACACTGCGCCCTGGGAGTCATCGAAGGCGCCTCGTCGACCG
TGACGACTGCGGCAAATGCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDMPASPGVSTQCHKVGKVLAIVGDKWTVMIVRVLIDRPRRFNEIKRTIGGISQQMLTRTLKALERDGMVSRTVYPTVPP
QVEYALTPLGQSLAVPVRALGAWAGEHLDEIESNQARYDQDKHARATRRGTGQA

Sequences:

>Translated_134_residues
MDMPASPGVSTQCHKVGKVLAIVGDKWTVMIVRVLIDRPRRFNEIKRTIGGISQQMLTRTLKALERDGMVSRTVYPTVPP
QVEYALTPLGQSLAVPVRALGAWAGEHLDEIESNQARYDQDKHARATRRGTGQA
>Mature_134_residues
MDMPASPGVSTQCHKVGKVLAIVGDKWTVMIVRVLIDRPRRFNEIKRTIGGISQQMLTRTLKALERDGMVSRTVYPTVPP
QVEYALTPLGQSLAVPVRALGAWAGEHLDEIESNQARYDQDKHARATRRGTGQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=94, Percent_Identity=44.6808510638298, Blast_Score=93, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14834; Mature: 14834

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMPASPGVSTQCHKVGKVLAIVGDKWTVMIVRVLIDRPRRFNEIKRTIGGISQQMLTRT
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LKALERDGMVSRTVYPTVPPQVEYALTPLGQSLAVPVRALGAWAGEHLDEIESNQARYDQ
HHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DKHARATRRGTGQA
HHHHHHHHCCCCCC
>Mature Secondary Structure
MDMPASPGVSTQCHKVGKVLAIVGDKWTVMIVRVLIDRPRRFNEIKRTIGGISQQMLTRT
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LKALERDGMVSRTVYPTVPPQVEYALTPLGQSLAVPVRALGAWAGEHLDEIESNQARYDQ
HHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DKHARATRRGTGQA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]