| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784002
Identifier: 91784002
GI number: 91784002
Start: 2916385
End: 2917491
Strand: Direct
Name: 91784002
Synonym: Bxe_A1803
Alternate gene names: NA
Gene position: 2916385-2917491 (Clockwise)
Preceding gene: 91784001
Following gene: 91784003
Centisome position: 59.57
GC content: 62.51
Gene sequence:
>1107_bases ATGCGCGGAGCGGACGGCTACACCGAGACGATGTTTACGATGGCAAGGCTGGATGACTTCGTGCCGGCCAATCACCCGCT GCGCCCGATTCGCATTTGGCTGAACGACGCACTCAAGCGCATGGACCCGGTGTTCGCTCGGATGTACGAGAGCGACGCGA AGGGTGGCCGCCCGAGCATCGCCCCGGAGAAATTGATTCGCGCGTTGCTGTTGCAGGTGCTGTATTCGATTCGAAGCGAA CGCATGCTGATGGAGCAAATCTCCTACAACATGCTGTTTCGCTGGTTCGTCGGCCTTTCGATGGACGATGCGGTGTGGGA CCACTCGACCTTCAGCAAGAACCGTGACCGGCTGCTCGAGCACGACGTCATCGTTGAACTGTTCAACGAGACGGTTGAGT CGGCGCATGCGCGCGGTTATCTGTCGGGCGAGCATTTCAGCGTGGACGGCACGCTGATTCAGGCGTGGGCCGGGCACAAG AGCTTCGTGAGCAAGAACAAGTCGGATGACGATGCGCCGCCTGATGGCGGTGCGCGTGAGCGCGAGAACTGGCACGGTGA GAAGCGTAGCAACGAGACCCACGAATCGAGCACGGACAGCCAGGCGAAGCTGTTTCGCAAGAGCCGGCGCACTGGTGCGC TGCTTTGCTACATCGGGCACCTGCTGACGGATAACCGGCATGGTCTGGTGGTGAACGCGCAAGTGACGCAGGCCAGCGGT ACGGCCGAACGCGACGCTGCGGCTCAAATGCTCGCGGACGCGGCGCAAGTTGCCAGCGCCCCCATTACTGTGGGGGCGGA CAGGAATTACGACACGGCGGGCTTCGTGGCGAGTTGCCGCGCCAATCGTGTGACGCCGCACGTGGCGCAAAACGACGGCC GCGCGGGTGGCTCGGCGATTGACGCTCGGACGACACGCTGGGCTGGCTACGCCATCAGCCAGCGCAAGCGCAAATGCATT GAGCAGGTCTTCGGCTGGGGTAAGACAGTCGGCCGGATTCGTCAGGCGATGTATCGCGGCCGCGAGCGGGTCGAGCAGTT GTTCTTGCTGACACAGGCGGCCTACAACCTCACACGCATGCGTACGCTCGCGAACAGAACGGAGTAG
Upstream 100 bases:
>100_bases CGCTCTCCTAGCAGGCTGTTGAAATAGCTTCCGCCATGGTCATCGGACCGGGAGCGGTAAACGTTGAAACAAGGAAGCGG ACAACACTGAGACCGAAGCG
Downstream 100 bases:
>100_bases AAGTGCAAATCGGCGAGGAGACGGCATTGGTTCCACCTGAATTAAGGGCGCTCGCTATCAAATCGACACGAACCAAACCG ACGCGATGGTTCTTTAGAAA
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; ISGsu3 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; Transposase Or Inactivated Derivative; Transposase And Inactivated Derivative; IS5 Family Transposase; Transposase Fragment; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase IS4 Family; Transposase Fragment IS5 Family; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; ISGsu2 Transposase; Prevent-Host-Death Family Protein; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRGADGYTETMFTMARLDDFVPANHPLRPIRIWLNDALKRMDPVFARMYESDAKGGRPSIAPEKLIRALLLQVLYSIRSE RMLMEQISYNMLFRWFVGLSMDDAVWDHSTFSKNRDRLLEHDVIVELFNETVESAHARGYLSGEHFSVDGTLIQAWAGHK SFVSKNKSDDDAPPDGGARERENWHGEKRSNETHESSTDSQAKLFRKSRRTGALLCYIGHLLTDNRHGLVVNAQVTQASG TAERDAAAQMLADAAQVASAPITVGADRNYDTAGFVASCRANRVTPHVAQNDGRAGGSAIDARTTRWAGYAISQRKRKCI EQVFGWGKTVGRIRQAMYRGRERVEQLFLLTQAAYNLTRMRTLANRTE
Sequences:
>Translated_368_residues MRGADGYTETMFTMARLDDFVPANHPLRPIRIWLNDALKRMDPVFARMYESDAKGGRPSIAPEKLIRALLLQVLYSIRSE RMLMEQISYNMLFRWFVGLSMDDAVWDHSTFSKNRDRLLEHDVIVELFNETVESAHARGYLSGEHFSVDGTLIQAWAGHK SFVSKNKSDDDAPPDGGARERENWHGEKRSNETHESSTDSQAKLFRKSRRTGALLCYIGHLLTDNRHGLVVNAQVTQASG TAERDAAAQMLADAAQVASAPITVGADRNYDTAGFVASCRANRVTPHVAQNDGRAGGSAIDARTTRWAGYAISQRKRKCI EQVFGWGKTVGRIRQAMYRGRERVEQLFLLTQAAYNLTRMRTLANRTE >Mature_368_residues MRGADGYTETMFTMARLDDFVPANHPLRPIRIWLNDALKRMDPVFARMYESDAKGGRPSIAPEKLIRALLLQVLYSIRSE RMLMEQISYNMLFRWFVGLSMDDAVWDHSTFSKNRDRLLEHDVIVELFNETVESAHARGYLSGEHFSVDGTLIQAWAGHK SFVSKNKSDDDAPPDGGARERENWHGEKRSNETHESSTDSQAKLFRKSRRTGALLCYIGHLLTDNRHGLVVNAQVTQASG TAERDAAAQMLADAAQVASAPITVGADRNYDTAGFVASCRANRVTPHVAQNDGRAGGSAIDARTTRWAGYAISQRKRKCI EQVFGWGKTVGRIRQAMYRGRERVEQLFLLTQAAYNLTRMRTLANRTE
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41412; Mature: 41412
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGADGYTETMFTMARLDDFVPANHPLRPIRIWLNDALKRMDPVFARMYESDAKGGRPSI CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC APEKLIRALLLQVLYSIRSERMLMEQISYNMLFRWFVGLSMDDAVWDHSTFSKNRDRLLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCHHHHHH HDVIVELFNETVESAHARGYLSGEHFSVDGTLIQAWAGHKSFVSKNKSDDDAPPDGGARE HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCC RENWHGEKRSNETHESSTDSQAKLFRKSRRTGALLCYIGHLLTDNRHGLVVNAQVTQASG CHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCC TAERDAAAQMLADAAQVASAPITVGADRNYDTAGFVASCRANRVTPHVAQNDGRAGGSAI CHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCC DARTTRWAGYAISQRKRKCIEQVFGWGKTVGRIRQAMYRGRERVEQLFLLTQAAYNLTRM CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLANRTE HHHHHCCC >Mature Secondary Structure MRGADGYTETMFTMARLDDFVPANHPLRPIRIWLNDALKRMDPVFARMYESDAKGGRPSI CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC APEKLIRALLLQVLYSIRSERMLMEQISYNMLFRWFVGLSMDDAVWDHSTFSKNRDRLLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCHHHHHH HDVIVELFNETVESAHARGYLSGEHFSVDGTLIQAWAGHKSFVSKNKSDDDAPPDGGARE HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCC RENWHGEKRSNETHESSTDSQAKLFRKSRRTGALLCYIGHLLTDNRHGLVVNAQVTQASG CHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCC TAERDAAAQMLADAAQVASAPITVGADRNYDTAGFVASCRANRVTPHVAQNDGRAGGSAI CHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCC DARTTRWAGYAISQRKRKCIEQVFGWGKTVGRIRQAMYRGRERVEQLFLLTQAAYNLTRM CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLANRTE HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA