Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91784000

Identifier: 91784000

GI number: 91784000

Start: 2914184

End: 2915374

Strand: Direct

Name: 91784000

Synonym: Bxe_A1805

Alternate gene names: NA

Gene position: 2914184-2915374 (Clockwise)

Preceding gene: 91783999

Following gene: 91784001

Centisome position: 59.52

GC content: 56.59

Gene sequence:

>1191_bases
ATGGCTGATTTGAATGAGCTGACCGCACAGGAAATAGGACGCCGCCTGCGAATAGCGCGAGAGAACGCTGCCATTCGACA
AGAGGATGCGGCCCAGATCATCGGCGTTTCCCGACCCACGCTCGTATCCATCGAGAAGGGCGTACGCCGCGTGCGTATTC
AGGAAATCCAGTTACTCGGCCGCCACTACGGCGTATCGGTGAACGCCCTGCTCCGCCGGGAAGCCGTCCACGTCGACTTA
GTGCCTCGCTTTCGCAAATTGCGTGAGACAGAGGACGCGCAAACCGCTGAAGCCATTCGGCTATTCAACGACTTGATTAA
GGCGGATGTAGAAATGGAGAACATACTCGGCATCCAGCGCCGACGAAATTACCCACCGGAGCGCGGCCTCAATGAGGGCG
ACGTCACGGCACTCGCCGAAAAGCATGCAAAGGAATTGCGCGACTGGCTTGGTCTTGGCCCGGGACCGATCGCCGACATT
TTTTCGGTAATCGAGCTGGATCTCGGCATACGCTTGTATCAACGTCGCCTTGCTTCCAACTCGAAGATTGCGGGCCTCTT
TAGCTACGATGAAAACATTGGTGCCTGCATTCTTCTCAACGCTAGCCATCCACTACCCCGGCGCATCCAGTCCGCGGCGC
ATGAGCTCGGTCACTTCTATGGCACGCGTCAGACTCCGGAGGTGCTCGAAGAAGATGAGAAATTTCTGTCACGCGACGAA
CGCTACGCCAATGCTTTTGGTCGTGCCTTCCTGACGCCGGCCGAAAGTTTCTCGGAAAGCTTCGGCCAATTGAAGCAAAT
TACCGGCAAGACGACCCGGCGTCTAATAATTCTCCTGGCCCAACAGTACAACATATCGCGGCAGGCGTGCTGCCTCCGGC
TCGAGGAATTAGGACTTGCCAAGAAAGGTACCTGGGTCTGGTTCGAAAACAATGGCGGCATCACCGATGAGCACGCTCGG
GAGGTTCTCGGCGAAATGACTGAACGCCGAGATCCTGCGAAAAGCGATGCCGACCGCCCCATCTCCCACCGCCTGAGCCT
GATGGCACATGCTGCCTGGAAACGCGAATTGATGTCGGAAGGACAATTGGCGGAGCTACTGAAGCTAGGCCGAGTGGAGG
TACGCGGCATTATCGATCAAATCGAGCTTGAGGAAAGGGATACGGATGAACTGCTCAAGCTCCCGGATTGA

Upstream 100 bases:

>100_bases
CTGAAGTTGATGTTGGCATCGCATGCCAAGGAATGGCGAGCATTTCTGTCCGCTCAAGGGCAACAGAGCTTCCTGAACAA
CTGGATGGATGGAGGACGCT

Downstream 100 bases:

>100_bases
TATCGTGAACCAATGGGTTCTCGACACCAGCGTACTAATTAACCTTCACGCGTGCAAATATGGTGAACGAATCCTCTCGG
CAATCCCGAACGACATTCTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Conserved Domain Protein

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MADLNELTAQEIGRRLRIARENAAIRQEDAAQIIGVSRPTLVSIEKGVRRVRIQEIQLLGRHYGVSVNALLRREAVHVDL
VPRFRKLRETEDAQTAEAIRLFNDLIKADVEMENILGIQRRRNYPPERGLNEGDVTALAEKHAKELRDWLGLGPGPIADI
FSVIELDLGIRLYQRRLASNSKIAGLFSYDENIGACILLNASHPLPRRIQSAAHELGHFYGTRQTPEVLEEDEKFLSRDE
RYANAFGRAFLTPAESFSESFGQLKQITGKTTRRLIILLAQQYNISRQACCLRLEELGLAKKGTWVWFENNGGITDEHAR
EVLGEMTERRDPAKSDADRPISHRLSLMAHAAWKRELMSEGQLAELLKLGRVEVRGIIDQIELEERDTDELLKLPD

Sequences:

>Translated_396_residues
MADLNELTAQEIGRRLRIARENAAIRQEDAAQIIGVSRPTLVSIEKGVRRVRIQEIQLLGRHYGVSVNALLRREAVHVDL
VPRFRKLRETEDAQTAEAIRLFNDLIKADVEMENILGIQRRRNYPPERGLNEGDVTALAEKHAKELRDWLGLGPGPIADI
FSVIELDLGIRLYQRRLASNSKIAGLFSYDENIGACILLNASHPLPRRIQSAAHELGHFYGTRQTPEVLEEDEKFLSRDE
RYANAFGRAFLTPAESFSESFGQLKQITGKTTRRLIILLAQQYNISRQACCLRLEELGLAKKGTWVWFENNGGITDEHAR
EVLGEMTERRDPAKSDADRPISHRLSLMAHAAWKRELMSEGQLAELLKLGRVEVRGIIDQIELEERDTDELLKLPD
>Mature_395_residues
ADLNELTAQEIGRRLRIARENAAIRQEDAAQIIGVSRPTLVSIEKGVRRVRIQEIQLLGRHYGVSVNALLRREAVHVDLV
PRFRKLRETEDAQTAEAIRLFNDLIKADVEMENILGIQRRRNYPPERGLNEGDVTALAEKHAKELRDWLGLGPGPIADIF
SVIELDLGIRLYQRRLASNSKIAGLFSYDENIGACILLNASHPLPRRIQSAAHELGHFYGTRQTPEVLEEDEKFLSRDER
YANAFGRAFLTPAESFSESFGQLKQITGKTTRRLIILLAQQYNISRQACCLRLEELGLAKKGTWVWFENNGGITDEHARE
VLGEMTERRDPAKSDADRPISHRLSLMAHAAWKRELMSEGQLAELLKLGRVEVRGIIDQIELEERDTDELLKLPD

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44991; Mature: 44860

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLNELTAQEIGRRLRIARENAAIRQEDAAQIIGVSRPTLVSIEKGVRRVRIQEIQLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RHYGVSVNALLRREAVHVDLVPRFRKLRETEDAQTAEAIRLFNDLIKADVEMENILGIQR
HHHCCHHHHHHHHHHHHEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RRNYPPERGLNEGDVTALAEKHAKELRDWLGLGPGPIADIFSVIELDLGIRLYQRRLASN
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SKIAGLFSYDENIGACILLNASHPLPRRIQSAAHELGHFYGTRQTPEVLEEDEKFLSRDE
CCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RYANAFGRAFLTPAESFSESFGQLKQITGKTTRRLIILLAQQYNISRQACCLRLEELGLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
KKGTWVWFENNGGITDEHAREVLGEMTERRDPAKSDADRPISHRLSLMAHAAWKRELMSE
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GQLAELLKLGRVEVRGIIDQIELEERDTDELLKLPD
CHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
ADLNELTAQEIGRRLRIARENAAIRQEDAAQIIGVSRPTLVSIEKGVRRVRIQEIQLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RHYGVSVNALLRREAVHVDLVPRFRKLRETEDAQTAEAIRLFNDLIKADVEMENILGIQR
HHHCCHHHHHHHHHHHHEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RRNYPPERGLNEGDVTALAEKHAKELRDWLGLGPGPIADIFSVIELDLGIRLYQRRLASN
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SKIAGLFSYDENIGACILLNASHPLPRRIQSAAHELGHFYGTRQTPEVLEEDEKFLSRDE
CCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RYANAFGRAFLTPAESFSESFGQLKQITGKTTRRLIILLAQQYNISRQACCLRLEELGLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
KKGTWVWFENNGGITDEHAREVLGEMTERRDPAKSDADRPISHRLSLMAHAAWKRELMSE
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GQLAELLKLGRVEVRGIIDQIELEERDTDELLKLPD
CHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA