| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is amnD [H]
Identifier: 91783977
GI number: 91783977
Start: 2890232
End: 2890630
Strand: Reverse
Name: amnD [H]
Synonym: Bxe_A1831
Alternate gene names: 91783977
Gene position: 2890630-2890232 (Counterclockwise)
Preceding gene: 91783978
Following gene: 91783974
Centisome position: 59.04
GC content: 56.89
Gene sequence:
>399_bases ATGACAATCGACGGAAAAGCAGCGCCGCTTGGTAATTACCCCGCGGTGAAAATTTTCGGAAATCTGATCTTTGTTTCGGG TATCAGTGCGCGCCTGCCGGATAATCGCGTTGCGGGAGTCGAACAGATTGGTGGGCAGATAAAGGGTGACGCGGCGATAC AGACGCAGGTTATCCTGGACAAACTTGACGCGCTGCTCCAGGAACATGGCTCGTGTCTGGAGGAGTGTCTTGACGTCACC GCTTTTCTGACCGATATGGACGACTTCCCGGCATTCAACCGGGTCTATGCCGAACATTTCCGGATCGAAACGGGGCCGGC CCGCACCACGCTCGCCGTTAAAGCGCTGCCGAAGCCCGGGATGGTTGTCGAACTGAAGGTTGTCGCGGCTCGTCCGTGA
Upstream 100 bases:
>100_bases TCAATGTACGCGGCTTCTCTGGCGACATGGATCGAAGCCGTCGCACAGGAAGCCGCCCGGTTCAGGGTTGCGCCGATTCT GCACAATTTGCGGGGACACG
Downstream 100 bases:
>100_bases ATTCGACATGCAATATCGAGTCTTTCTGAGCGCGCGCAGCGCGTTGATAGAGCATAGGTGTCGTCATCAGGACGCGTAAG GCGCCAGGTTGCGACGGTCT
Product: putative 2-aminomuconate deaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVT AFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP
Sequences:
>Translated_132_residues MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVT AFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP >Mature_131_residues TIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVTA FLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP
Specific function: Involved in the modified meta-cleavage pathway for the 2-aminophenol catabolism. Only active toward 2-aminomuconic acid [H]
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 2-aminomuconate deaminase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320899, Length=112, Percent_Identity=33.0357142857143, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013813 - InterPro: IPR006175 [H]
Pfam domain/function: PF01042 Ribonuc_L-PSP [H]
EC number: =3.5.99.5 [H]
Molecular weight: Translated: 14163; Mature: 14031
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILD CCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH KLDALLQEHGSCLEECLDVTAFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCC MVVELKVVAARP EEEEEEEEEECC >Mature Secondary Structure TIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILD CCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH KLDALLQEHGSCLEECLDVTAFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCC MVVELKVVAARP EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9169437; 11081795 [H]