Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is amnD [H]

Identifier: 91783977

GI number: 91783977

Start: 2890232

End: 2890630

Strand: Reverse

Name: amnD [H]

Synonym: Bxe_A1831

Alternate gene names: 91783977

Gene position: 2890630-2890232 (Counterclockwise)

Preceding gene: 91783978

Following gene: 91783974

Centisome position: 59.04

GC content: 56.89

Gene sequence:

>399_bases
ATGACAATCGACGGAAAAGCAGCGCCGCTTGGTAATTACCCCGCGGTGAAAATTTTCGGAAATCTGATCTTTGTTTCGGG
TATCAGTGCGCGCCTGCCGGATAATCGCGTTGCGGGAGTCGAACAGATTGGTGGGCAGATAAAGGGTGACGCGGCGATAC
AGACGCAGGTTATCCTGGACAAACTTGACGCGCTGCTCCAGGAACATGGCTCGTGTCTGGAGGAGTGTCTTGACGTCACC
GCTTTTCTGACCGATATGGACGACTTCCCGGCATTCAACCGGGTCTATGCCGAACATTTCCGGATCGAAACGGGGCCGGC
CCGCACCACGCTCGCCGTTAAAGCGCTGCCGAAGCCCGGGATGGTTGTCGAACTGAAGGTTGTCGCGGCTCGTCCGTGA

Upstream 100 bases:

>100_bases
TCAATGTACGCGGCTTCTCTGGCGACATGGATCGAAGCCGTCGCACAGGAAGCCGCCCGGTTCAGGGTTGCGCCGATTCT
GCACAATTTGCGGGGACACG

Downstream 100 bases:

>100_bases
ATTCGACATGCAATATCGAGTCTTTCTGAGCGCGCGCAGCGCGTTGATAGAGCATAGGTGTCGTCATCAGGACGCGTAAG
GCGCCAGGTTGCGACGGTCT

Product: putative 2-aminomuconate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVT
AFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP

Sequences:

>Translated_132_residues
MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVT
AFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP
>Mature_131_residues
TIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILDKLDALLQEHGSCLEECLDVTA
FLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPGMVVELKVVAARP

Specific function: Involved in the modified meta-cleavage pathway for the 2-aminophenol catabolism. Only active toward 2-aminomuconic acid [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2-aminomuconate deaminase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320899, Length=112, Percent_Identity=33.0357142857143, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: =3.5.99.5 [H]

Molecular weight: Translated: 14163; Mature: 14031

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILD
CCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
KLDALLQEHGSCLEECLDVTAFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
MVVELKVVAARP
EEEEEEEEEECC
>Mature Secondary Structure 
TIDGKAAPLGNYPAVKIFGNLIFVSGISARLPDNRVAGVEQIGGQIKGDAAIQTQVILD
CCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH
KLDALLQEHGSCLEECLDVTAFLTDMDDFPAFNRVYAEHFRIETGPARTTLAVKALPKPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
MVVELKVVAARP
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9169437; 11081795 [H]