| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is adhA [H]
Identifier: 91783965
GI number: 91783965
Start: 2878185
End: 2879171
Strand: Reverse
Name: adhA [H]
Synonym: Bxe_A1844
Alternate gene names: 91783965
Gene position: 2879171-2878185 (Counterclockwise)
Preceding gene: 91783966
Following gene: 91783956
Centisome position: 58.81
GC content: 66.46
Gene sequence:
>987_bases ATGCGTGCGATGGTGTTCGACGGTAGCTCAGCGTTGTTGCGTGAGCAGGAGGTGCCGGACCCGAAGCCCGGTCCCGGGCA ACTGCTGATCCAGATTCACGCGTGCGGCGTGTGCCGCACCGATCTTCATCTGGTTGACCATGAGCTCGAGCATCCGAAGC AGCCCGTGATTCCGGGCCACGAGATCGTCGGTACCGTGGCCGGGCTCGGCGCGGGTGTGACGGGCTTTGCCGTCGGCGAC CGGGTGGGCGTGCCGTGGCTCGGCCACACCTGCGGGCATTGCCGCTACTGCCTGTCGGCGCGGGAAAATCTCTGCGACGA ACCGGGCTTCACGGGCTATACGATCGACGGCGGTTACGCCGAGCGCACCGTCGCCGACAGTCAGTATTGCTTTCATCTGC CGGCGCAGTACCCGGATATCGAGGCGGCGCCGTTGCTGTGCGCGGGTCTGATCGGCTACCGCACGTTGAAAATGGCGGGC GACGCCCAGCGGATCGGCATTTACGGTTTTGGCGCGGCGGCGCATATCGTCGCGCAGGTCGCGCTTCATCAGAAGCGCAC GGTGTATGCGTTCACGCGCCCGGGCGATCACGCGGCCCAGCAACTCGCGCTGCGCCTTGGCGCGGCGTGGGCGGGCGGCA GCGACGAAGCGCCGCCCGCCGAGCTGGATGCAGCCCTGATCTTCGCACCCGTCGGAGCGCTCGTTCCGCAAGCATTGCGC GCGGTGGCAAAAGGGGGGACGGTGGTGTGCGGCGGGATTCACATGAGCGACATTCCGTCATTCCCCTACGCATTTCTGTG GGGCGAGCGGCGCGTGGTATCGATCGCCAATCTGACGCGCGAGGACGGACTTGCCTTCATGCGAATTGCTACCGAGCGGC GCCTCGAGATCGACACGACCACTTACGCGCTGACGGATGCGAACCGGGCACTGAGCGATCTGCGGGATGGCAGGTTAACC GGCGCCGCGGTGCTCGTAGTCCGGTAG
Upstream 100 bases:
>100_bases GCCGGCAGGGCAGCCGGCGTGGGTCGCAGTATCGCGTCGCGATGCTTGCCGCGGCGGGACTTGATATGTACGCTGGCTTA CCAGGTTTGAGGAGAACCGT
Downstream 100 bases:
>100_bases TCCGGTAGTCCATTAGTTCGTTGGCCGTTTGGCGCGACGCGGCGCGCCATTCCGTTGCCGTGCGCTTCGCGCTGGCGCTA CCTTCCGGCCCCGGCGAATC
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRAMVFDGSSALLREQEVPDPKPGPGQLLIQIHACGVCRTDLHLVDHELEHPKQPVIPGHEIVGTVAGLGAGVTGFAVGD RVGVPWLGHTCGHCRYCLSARENLCDEPGFTGYTIDGGYAERTVADSQYCFHLPAQYPDIEAAPLLCAGLIGYRTLKMAG DAQRIGIYGFGAAAHIVAQVALHQKRTVYAFTRPGDHAAQQLALRLGAAWAGGSDEAPPAELDAALIFAPVGALVPQALR AVAKGGTVVCGGIHMSDIPSFPYAFLWGERRVVSIANLTREDGLAFMRIATERRLEIDTTTYALTDANRALSDLRDGRLT GAAVLVVR
Sequences:
>Translated_328_residues MRAMVFDGSSALLREQEVPDPKPGPGQLLIQIHACGVCRTDLHLVDHELEHPKQPVIPGHEIVGTVAGLGAGVTGFAVGD RVGVPWLGHTCGHCRYCLSARENLCDEPGFTGYTIDGGYAERTVADSQYCFHLPAQYPDIEAAPLLCAGLIGYRTLKMAG DAQRIGIYGFGAAAHIVAQVALHQKRTVYAFTRPGDHAAQQLALRLGAAWAGGSDEAPPAELDAALIFAPVGALVPQALR AVAKGGTVVCGGIHMSDIPSFPYAFLWGERRVVSIANLTREDGLAFMRIATERRLEIDTTTYALTDANRALSDLRDGRLT GAAVLVVR >Mature_328_residues MRAMVFDGSSALLREQEVPDPKPGPGQLLIQIHACGVCRTDLHLVDHELEHPKQPVIPGHEIVGTVAGLGAGVTGFAVGD RVGVPWLGHTCGHCRYCLSARENLCDEPGFTGYTIDGGYAERTVADSQYCFHLPAQYPDIEAAPLLCAGLIGYRTLKMAG DAQRIGIYGFGAAAHIVAQVALHQKRTVYAFTRPGDHAAQQLALRLGAAWAGGSDEAPPAELDAALIFAPVGALVPQALR AVAKGGTVVCGGIHMSDIPSFPYAFLWGERRVVSIANLTREDGLAFMRIATERRLEIDTTTYALTDANRALSDLRDGRLT GAAVLVVR
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI71565152, Length=98, Percent_Identity=39.7959183673469, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4501933, Length=93, Percent_Identity=40.8602150537634, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI87081918, Length=319, Percent_Identity=32.9153605015674, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082401, Length=324, Percent_Identity=29.0123456790123, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1786518, Length=217, Percent_Identity=35.0230414746544, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790045, Length=171, Percent_Identity=34.5029239766082, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787863, Length=230, Percent_Identity=25.2173913043478, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI226510992, Length=296, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788073, Length=133, Percent_Identity=32.3308270676692, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082125, Length=142, Percent_Identity=31.6901408450704, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17562584, Length=336, Percent_Identity=25.297619047619, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562582, Length=340, Percent_Identity=27.3529411764706, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71988145, Length=328, Percent_Identity=23.4756097560976, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562876, Length=126, Percent_Identity=38.8888888888889, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17562878, Length=126, Percent_Identity=37.3015873015873, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=159, Percent_Identity=39.622641509434, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324486, Length=159, Percent_Identity=37.1069182389937, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6319621, Length=210, Percent_Identity=35.2380952380952, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323729, Length=159, Percent_Identity=35.8490566037736, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319949, Length=201, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323980, Length=150, Percent_Identity=37.3333333333333, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319257, Length=205, Percent_Identity=30.2439024390244, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319258, Length=255, Percent_Identity=25.4901960784314, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737897, Length=152, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 34928; Mature: 34928
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMVFDGSSALLREQEVPDPKPGPGQLLIQIHACGVCRTDLHLVDHELEHPKQPVIPGH CCEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCEECHHHHHHHHHHCCCCCCCCCCH EIVGTVAGLGAGVTGFAVGDRVGVPWLGHTCGHCRYCLSARENLCDEPGFTGYTIDGGYA HHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCC ERTVADSQYCFHLPAQYPDIEAAPLLCAGLIGYRTLKMAGDAQRIGIYGFGAAAHIVAQV CCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCHHHHHHHHH ALHQKRTVYAFTRPGDHAAQQLALRLGAAWAGGSDEAPPAELDAALIFAPVGALVPQALR HHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHEEHHHHHHHHHHHH AVAKGGTVVCGGIHMSDIPSFPYAFLWGERRVVSIANLTREDGLAFMRIATERRLEIDTT HHHCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEHHHHHHCCEEEEEECCCCEEEECCE TYALTDANRALSDLRDGRLTGAAVLVVR EEEEECHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MRAMVFDGSSALLREQEVPDPKPGPGQLLIQIHACGVCRTDLHLVDHELEHPKQPVIPGH CCEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCEECHHHHHHHHHHCCCCCCCCCCH EIVGTVAGLGAGVTGFAVGDRVGVPWLGHTCGHCRYCLSARENLCDEPGFTGYTIDGGYA HHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCC ERTVADSQYCFHLPAQYPDIEAAPLLCAGLIGYRTLKMAGDAQRIGIYGFGAAAHIVAQV CCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCHHHHHHHHH ALHQKRTVYAFTRPGDHAAQQLALRLGAAWAGGSDEAPPAELDAALIFAPVGALVPQALR HHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHEEHHHHHHHHHHHH AVAKGGTVVCGGIHMSDIPSFPYAFLWGERRVVSIANLTREDGLAFMRIATERRLEIDTT HHHCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEHHHHHHCCEEEEEECCCCEEEECCE TYALTDANRALSDLRDGRLTGAAVLVVR EEEEECHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]