| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783957
Identifier: 91783957
GI number: 91783957
Start: 2870873
End: 2871709
Strand: Direct
Name: 91783957
Synonym: Bxe_A1854
Alternate gene names: NA
Gene position: 2870873-2871709 (Clockwise)
Preceding gene: 91783955
Following gene: 91783958
Centisome position: 58.64
GC content: 68.58
Gene sequence:
>837_bases ATGAGCTACAAAACCATCGTTGTTCATCTGGACACCAGCCAGCGCGCCCATCCGCGGCTCGAAATCGCACTGCGTCTGGC CAACCAGTTCGGCGCGCATCTGGTCGGCGCGTTCGCCGTGTTCTCGCCGGACCCGCGCTCGCTCTATGTGATGGCCGGCA CGGCGGAGTATTACCGCACGCACGAGGAGATGCGCGCCGAGCGCAGCGCCGCGCTCGAACGCCTGTTTCACGCCGAATTG CGGCGCGCCGGCGTGTCGGGCGAATGGCTCGCCATCGAGGAGCCCGCCAGTCTCGCCATACCGCGCGCGGGCCGCTGCGC CGACCTGATCGTGGCCGGTCAGGACAATCCGGGCGACCCGGAATCGTATGTCGGCGACTTTTTCCCGGAAAACCTCGTGC TGTCGAGCGGCCGGCCGGTATTGCTCGCGCCTTATGCAGGCAATGAAAGGACGACGGGCAGCCGGGTGCTGGTGGCGTGG GACGGCAGCCGCGAAGCCACTCGCGCCGTGCACGACGCGCTGCCGTTCATGCAGGCGGCGAGCAGCACCACCGTCCTCAC CGTCAATGGCACGGACGACGGCGAAGGCAGCCGCATTCCCGGCGCGGACATCGCCGCCGTGATCGCGCGGCATGGCGTGC GCGTCGAGCTCGCCGATATCGAAACCGGGCCGGGCGGATCGGTCGGCGAGGTGCTGCTCTCGCAGGTCGCCGACAGCGGC GCCGATCTGCTGGTGATGGGCGCGTATGGCCACGCGCGCTGGCGTGAACTGGTGATGGGCGGCGCCACGCGCACGATTCT CCGCTCGATGACCGTGCCGGTACTGATGTCGCACTGA
Upstream 100 bases:
>100_bases GCTGGAAGCGCCGTTGATCTGCGTCAATGAGACCGGCGCCACCGTTCATAGACTCAAGCTCACCCGTGCGTGCGTCACCT TTTCTTCCGGAGCGACTGTC
Downstream 100 bases:
>100_bases GCGCGGCATCTGCCCTTCTTATTCTGGAGTGTTCGCCATGTATAAACAGATTCTGGTTGCCGTCGACGGCAGCGAAACCT CGTCGCACGCGCTGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSYKTIVVHLDTSQRAHPRLEIALRLANQFGAHLVGAFAVFSPDPRSLYVMAGTAEYYRTHEEMRAERSAALERLFHAEL RRAGVSGEWLAIEEPASLAIPRAGRCADLIVAGQDNPGDPESYVGDFFPENLVLSSGRPVLLAPYAGNERTTGSRVLVAW DGSREATRAVHDALPFMQAASSTTVLTVNGTDDGEGSRIPGADIAAVIARHGVRVELADIETGPGGSVGEVLLSQVADSG ADLLVMGAYGHARWRELVMGGATRTILRSMTVPVLMSH
Sequences:
>Translated_278_residues MSYKTIVVHLDTSQRAHPRLEIALRLANQFGAHLVGAFAVFSPDPRSLYVMAGTAEYYRTHEEMRAERSAALERLFHAEL RRAGVSGEWLAIEEPASLAIPRAGRCADLIVAGQDNPGDPESYVGDFFPENLVLSSGRPVLLAPYAGNERTTGSRVLVAW DGSREATRAVHDALPFMQAASSTTVLTVNGTDDGEGSRIPGADIAAVIARHGVRVELADIETGPGGSVGEVLLSQVADSG ADLLVMGAYGHARWRELVMGGATRTILRSMTVPVLMSH >Mature_277_residues SYKTIVVHLDTSQRAHPRLEIALRLANQFGAHLVGAFAVFSPDPRSLYVMAGTAEYYRTHEEMRAERSAALERLFHAELR RAGVSGEWLAIEEPASLAIPRAGRCADLIVAGQDNPGDPESYVGDFFPENLVLSSGRPVLLAPYAGNERTTGSRVLVAWD GSREATRAVHDALPFMQAASSTTVLTVNGTDDGEGSRIPGADIAAVIARHGVRVELADIETGPGGSVGEVLLSQVADSGA DLLVMGAYGHARWRELVMGGATRTILRSMTVPVLMSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29742; Mature: 29611
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKTIVVHLDTSQRAHPRLEIALRLANQFGAHLVGAFAVFSPDPRSLYVMAGTAEYYRT CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH HEEMRAERSAALERLFHAELRRAGVSGEWLAIEEPASLAIPRAGRCADLIVAGQDNPGDP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCH ESYVGDFFPENLVLSSGRPVLLAPYAGNERTTGSRVLVAWDGSREATRAVHDALPFMQAA HHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC SSTTVLTVNGTDDGEGSRIPGADIAAVIARHGVRVELADIETGPGGSVGEVLLSQVADSG CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCC ADLLVMGAYGHARWRELVMGGATRTILRSMTVPVLMSH CCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCEEECC >Mature Secondary Structure SYKTIVVHLDTSQRAHPRLEIALRLANQFGAHLVGAFAVFSPDPRSLYVMAGTAEYYRT CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH HEEMRAERSAALERLFHAELRRAGVSGEWLAIEEPASLAIPRAGRCADLIVAGQDNPGDP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCH ESYVGDFFPENLVLSSGRPVLLAPYAGNERTTGSRVLVAWDGSREATRAVHDALPFMQAA HHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC SSTTVLTVNGTDDGEGSRIPGADIAAVIARHGVRVELADIETGPGGSVGEVLLSQVADSG CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCC ADLLVMGAYGHARWRELVMGGATRTILRSMTVPVLMSH CCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA