| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yaaH [C]
Identifier: 91783950
GI number: 91783950
Start: 2864032
End: 2864667
Strand: Direct
Name: yaaH [C]
Synonym: Bxe_A1861
Alternate gene names: 91783950
Gene position: 2864032-2864667 (Clockwise)
Preceding gene: 91783949
Following gene: 91783954
Centisome position: 58.5
GC content: 61.16
Gene sequence:
>636_bases ATGAACATCAAGGCTCCCAATCCCGCTTCACTCGGCCTCGCCGGCTTCGCCCTGACAACGTGGCTGCTCAGCATGATCAA CGCCGGCTGGTTCAGCGGCAACGCGATGGGGATGGTGCTTGCCGTCGCGTTCGCTTACGGCGGCACCGCCCAGGCGCTCG CCGGACTGATGGAAATTCCCCGCGGCAATACCTTCGGCGCGACCGCTTTCCTCAGTTACGGCGCCTTCTGGTGGTCGCTG GCGCTGTTCGTGCTGTTTCTGCACGGCACGGTGCCGGCCGCGTTTATCGGTTGGTATCTGTTTCTGTGGGGCGTGTTCAC GCTCTATATGTGGGTGGCGACATGGCGATCCGCACGCGTGCTGCAACTGGTGTTTCTCTCGCTGTGGATCACGTTCTTCG TGCTCGCCGCGAGCGAATGGACCGGACTCGAATGGCTGCATCACGCCGGCGGCTACCTGGGAATGCTTACCGCGCTACTG GCGTTCTATCTGTCGGCCGCGGAAATCATCAACGAGACTCATGGGCACGTGGTATTGCCTACAGGTGTCGCGAGCGAACG ACTTGCTCTGACGTTGTCGATTCAGGAAGAGTTGCCGCTTGGCCTGCCGATCGAGGAAAAGCTGCGCAATGCGTGA
Upstream 100 bases:
>100_bases TCGCGCATCTCTTCCGGCGCGATCCGATGTCGCGCGTGCACCCGCACGTGCGCGCGCAACCCAATTTTCAGCGTTCCTGC ATGGAACGGAGGATGTCATC
Downstream 100 bases:
>100_bases TGAGGTTCGCTGCTGATGGCGCTCGTGTTGCCGCCTTTGTATTGCCGCCCTTGTATTGCCGCAGCGTTTCGCCATCCTGG GCGGCGCTGCGGCACACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNIKAPNPASLGLAGFALTTWLLSMINAGWFSGNAMGMVLAVAFAYGGTAQALAGLMEIPRGNTFGATAFLSYGAFWWSL ALFVLFLHGTVPAAFIGWYLFLWGVFTLYMWVATWRSARVLQLVFLSLWITFFVLAASEWTGLEWLHHAGGYLGMLTALL AFYLSAAEIINETHGHVVLPTGVASERLALTLSIQEELPLGLPIEEKLRNA
Sequences:
>Translated_211_residues MNIKAPNPASLGLAGFALTTWLLSMINAGWFSGNAMGMVLAVAFAYGGTAQALAGLMEIPRGNTFGATAFLSYGAFWWSL ALFVLFLHGTVPAAFIGWYLFLWGVFTLYMWVATWRSARVLQLVFLSLWITFFVLAASEWTGLEWLHHAGGYLGMLTALL AFYLSAAEIINETHGHVVLPTGVASERLALTLSIQEELPLGLPIEEKLRNA >Mature_211_residues MNIKAPNPASLGLAGFALTTWLLSMINAGWFSGNAMGMVLAVAFAYGGTAQALAGLMEIPRGNTFGATAFLSYGAFWWSL ALFVLFLHGTVPAAFIGWYLFLWGVFTLYMWVATWRSARVLQLVFLSLWITFFVLAASEWTGLEWLHHAGGYLGMLTALL AFYLSAAEIINETHGHVVLPTGVASERLALTLSIQEELPLGLPIEEKLRNA
Specific function: Unknown
COG id: COG1584
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPR1/FUN34/yaaH family [H]
Homologues:
Organism=Escherichia coli, GI1786191, Length=185, Percent_Identity=46.4864864864865, Blast_Score=147, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6324329, Length=185, Percent_Identity=36.2162162162162, Blast_Score=97, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6319855, Length=184, Percent_Identity=36.4130434782609, Blast_Score=82, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000791 [H]
Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]
EC number: NA
Molecular weight: Translated: 23034; Mature: 23034
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKAPNPASLGLAGFALTTWLLSMINAGWFSGNAMGMVLAVAFAYGGTAQALAGLMEIP CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC RGNTFGATAFLSYGAFWWSLALFVLFLHGTVPAAFIGWYLFLWGVFTLYMWVATWRSARV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLVFLSLWITFFVLAASEWTGLEWLHHAGGYLGMLTALLAFYLSAAEIINETHGHVVLP HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TGVASERLALTLSIQEELPLGLPIEEKLRNA CCCCCCCEEEEEEECCCCCCCCCHHHHHCCC >Mature Secondary Structure MNIKAPNPASLGLAGFALTTWLLSMINAGWFSGNAMGMVLAVAFAYGGTAQALAGLMEIP CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC RGNTFGATAFLSYGAFWWSLALFVLFLHGTVPAAFIGWYLFLWGVFTLYMWVATWRSARV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLVFLSLWITFFVLAASEWTGLEWLHHAGGYLGMLTALLAFYLSAAEIINETHGHVVLP HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TGVASERLALTLSIQEELPLGLPIEEKLRNA CCCCCCCEEEEEEECCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]