| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783942
Identifier: 91783942
GI number: 91783942
Start: 2854564
End: 2855214
Strand: Reverse
Name: 91783942
Synonym: Bxe_A1870
Alternate gene names: NA
Gene position: 2855214-2854564 (Counterclockwise)
Preceding gene: 91783943
Following gene: 91783941
Centisome position: 58.32
GC content: 62.52
Gene sequence:
>651_bases ATGAAGTCGGACATGGAATTGAAGCAGCAGGTCGAAGACGAACTGGCTTGGGATCCGGCAGTCGACGCTACGGACATCGG CGTCGAAGTGCATAACCGTGTCGTCACGCTATCGGGGCATCCCGTCAGCTACGCGGAGAAGCTTGCGGCGGAAAAAGCCG CGCAGCGTGTGGCAGGCGTGAAGGCCGTCGTGGTGGAACTGAACGTGCGCCTGCTGCATTCAGATGTGCGAACCGACGAG GAACTCGCCAACGCCGTTCGCTCCATCATGCGCTGGACCGTAGGTTTGAGCGAGGACGCGGTCAAGGTGCAGGTCGAGAA AGGCTGGGTGACATTGAGCGGCGAGGTCGACTGGGCTTATCAGAGCCATGTCGCCACACGCACGATTTCACATATGCGCG GTGTGACCGGGGTTTCGAACCTCATCCGGATCGGCGGCAAAGTGGCCGCGCTGGATATCGGCGAAGAGATCGGCAAGGCG CTGCGACGCCACGCCGAACGCGAAGCGAAGCACATCAGCGTGAAGGTGCACGAAGGAACGGTCACGCTGACGGGCACGGT CGACTCGATGGCGGAGCGCTCGGCCGCGCGCGGCGCGGCATGGTCGACGCCGGGTGTTCATGCGGTGATCGACAATCTGA CGGTGGGATAG
Upstream 100 bases:
>100_bases CGCAAGCGCCTGCAGATCAACTGATCCGTGGCCGCGCGGAACACGAGTGGCTTCGTGGGCCGCGCGCCGCCGCCAGCCGT ATGCCAACAAGGAGCACGCA
Downstream 100 bases:
>100_bases ACATGCTTGCCCGGCGGCGACCGGACGGGCACCGTACATGCGGCGCCTGCCATGCCCGGCAGATTGGACCACGCGGGACG ATGCAGGCGCGCCGAAGACG
Product: periplasmic phospholipid binding protein
Products: NA
Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKSDMELKQQVEDELAWDPAVDATDIGVEVHNRVVTLSGHPVSYAEKLAAEKAAQRVAGVKAVVVELNVRLLHSDVRTDE ELANAVRSIMRWTVGLSEDAVKVQVEKGWVTLSGEVDWAYQSHVATRTISHMRGVTGVSNLIRIGGKVAALDIGEEIGKA LRRHAEREAKHISVKVHEGTVTLTGTVDSMAERSAARGAAWSTPGVHAVIDNLTVG
Sequences:
>Translated_216_residues MKSDMELKQQVEDELAWDPAVDATDIGVEVHNRVVTLSGHPVSYAEKLAAEKAAQRVAGVKAVVVELNVRLLHSDVRTDE ELANAVRSIMRWTVGLSEDAVKVQVEKGWVTLSGEVDWAYQSHVATRTISHMRGVTGVSNLIRIGGKVAALDIGEEIGKA LRRHAEREAKHISVKVHEGTVTLTGTVDSMAERSAARGAAWSTPGVHAVIDNLTVG >Mature_216_residues MKSDMELKQQVEDELAWDPAVDATDIGVEVHNRVVTLSGHPVSYAEKLAAEKAAQRVAGVKAVVVELNVRLLHSDVRTDE ELANAVRSIMRWTVGLSEDAVKVQVEKGWVTLSGEVDWAYQSHVATRTISHMRGVTGVSNLIRIGGKVAALDIGEEIGKA LRRHAEREAKHISVKVHEGTVTLTGTVDSMAERSAARGAAWSTPGVHAVIDNLTVG
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23311; Mature: 23311
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDMELKQQVEDELAWDPAVDATDIGVEVHNRVVTLSGHPVSYAEKLAAEKAAQRVAGV CCCCHHHHHHHHHHHCCCCCCCCHHCCEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHH KAVVVELNVRLLHSDVRTDEELANAVRSIMRWTVGLSEDAVKVQVEKGWVTLSGEVDWAY HEEEEEHHHHEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCHHH QSHVATRTISHMRGVTGVSNLIRIGGKVAALDIGEEIGKALRRHAEREAKHISVKVHEGT HHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCE VTLTGTVDSMAERSAARGAAWSTPGVHAVIDNLTVG EEEEECHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MKSDMELKQQVEDELAWDPAVDATDIGVEVHNRVVTLSGHPVSYAEKLAAEKAAQRVAGV CCCCHHHHHHHHHHHCCCCCCCCHHCCEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHH KAVVVELNVRLLHSDVRTDEELANAVRSIMRWTVGLSEDAVKVQVEKGWVTLSGEVDWAY HEEEEEHHHHEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCHHH QSHVATRTISHMRGVTGVSNLIRIGGKVAALDIGEEIGKALRRHAEREAKHISVKVHEGT HHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCE VTLTGTVDSMAERSAARGAAWSTPGVHAVIDNLTVG EEEEECHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA