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The map label for this gene is arcD [H]

Identifier: 91783934

GI number: 91783934

Start: 2846526

End: 2848007

Strand: Direct

Name: arcD [H]

Synonym: Bxe_A1878

Alternate gene names: 91783934

Gene position: 2846526-2848007 (Clockwise)

Preceding gene: 91783933

Following gene: 91783935

Centisome position: 58.14

GC content: 64.71

Gene sequence:

>1482_bases
ATGAAGAACCTGGCAGATTCATTTTCGGCACCATCCGTTCCAACGCCGGCCGGCCAGACTGGCAGCGCGGTAGCGAAGCC
ATTGCGGCTCGGCCTGCTCACCGCGCTGGTGATCGGTTCGATGATCGGCAGCGGCGTCTTCTCCCTGCCGCAGAACATGG
CATCCGGCGCGGGCGCCGCCGCCGTGCTGATCGGCTGGCTGATCACCGGCGTCGGCATGTTGATGCTTGCGTTTGTCTAT
CAGACGCTGACAACCCGCAAGCCTGAACTCGACAACGGCATCTACGCTTATGCGCGCGCCAGTGCCGGCGAGTTCGTCGG
CTTCAATTCGGCCTGGGGCTACTGGGTCAGCGCGTGGATCGGCAATGTCGGCTATCTCGTCATCGTGTTCGGCACGCTCG
GCTACTTCTTTCCCATATTCGGCGACGGCAACACGCCCGCGGCCGTGCTGGGCGCGTCCATCGCGCTATGGATCATGCAT
GCCGTGATCCTGCGCGGCGTGCGCAGCGCAGCGGTGCTCAACGCGATCACCACGGTCGCCAAGGTGATCCCGCTGCTGCT
GTTCATCGTGCTCGCGGCCATCGCCTTCAGAAGCCATGTGATCGCTCAGGACTTCTGGGGCAACGCGAAGCTCGGCAGCG
TCTTCACGCAAGTCAAAAGCACCATGCTGATCACCGTGTGGGTGTTCATCGGTATCGAAGGCGCCAGCGTGTTCTCGGCC
CGCGCGCAGCGGCGCGAGGATATCGGGCGCGCCACGCTGCTCGGCTTCGTGGTGGTCCTGCTCCTGCTGATGGCGGTCTC
CCTGCTGTCGCTCGGTATCGTGCCGCAAGGCGAGCTCGCCGCGATGAAGAACCCCTCGATGGCCGGCGTGCTCGACAAGG
CCGTCGGTGCCTGGGGCGCGGTGCTCATCAGTATCGGCCTGCTGGTCTCGGTGGGCGGTGCGTTGCTGGCGTGGACCCTG
CTGGCGGCGGAAACACTCTTCACGCCGGCGAACGGCGGCGTCATGCCGAAGTTTCTGGCGCGCGAAAACAGTCACGGCGT
ACCGGCCAATGCACTCTGGGTGACCAACGGACTGGTGCAACTGTTCCTGATCATCACGCTCGTCTCCAACGCGACCTATC
AGGCGCTGATTTCGCTTGCGACTTCGATGATCCTGATCCCGTATCTGTTCTCCGCTGTCTACGCGACTGGCATCGCCATG
CGCGGCGAAGGTTACGCGCCGGCGGAAGGCGCGCGCACCCGCGACATGCTGATCGGCGCGGCCGCAACCGTTTATTGCTG
CTGGCTGCTGTATGCCGCCGGCCCCAAGTATCTGCTGCTCTCCGCTCTGCTCTACGCGCCCGGCGTGCTGCTGTACGGCT
GGGCGAAACGCGAACGCGGCGCACGTCTGTTCAAGCCGTTCGAAGCGGTGATCCTCGCGGCTCTGCTCATCCTCGCCGCC
GTGGCGGCATGGCTGCTTTCCACCGGCGCGCTCGGTTTGTAA

Upstream 100 bases:

>100_bases
GGTGCGCGGACATGCGACCTTGCACGGACTGATCCAGATCAACTGCCGAGCCTTCATGAAGTGACCTAATCCACCTATCT
AAAAAACAGTGAGGTCCGTC

Downstream 100 bases:

>100_bases
GCCGCCGCTCTTCAGGAGAAACTCAATGACATTCGGCGTCTATTCCGAAATAGGCACGCTGCGCAAGGTCATGGTCTGCC
GCCCGGGACTTGCCCAGGCG

Product: arginine/ornithine APC family antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKNLADSFSAPSVPTPAGQTGSAVAKPLRLGLLTALVIGSMIGSGVFSLPQNMASGAGAAAVLIGWLITGVGMLMLAFVY
QTLTTRKPELDNGIYAYARASAGEFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYFFPIFGDGNTPAAVLGASIALWIMH
AVILRGVRSAAVLNAITTVAKVIPLLLFIVLAAIAFRSHVIAQDFWGNAKLGSVFTQVKSTMLITVWVFIGIEGASVFSA
RAQRREDIGRATLLGFVVVLLLLMAVSLLSLGIVPQGELAAMKNPSMAGVLDKAVGAWGAVLISIGLLVSVGGALLAWTL
LAAETLFTPANGGVMPKFLARENSHGVPANALWVTNGLVQLFLIITLVSNATYQALISLATSMILIPYLFSAVYATGIAM
RGEGYAPAEGARTRDMLIGAAATVYCCWLLYAAGPKYLLLSALLYAPGVLLYGWAKRERGARLFKPFEAVILAALLILAA
VAAWLLSTGALGL

Sequences:

>Translated_493_residues
MKNLADSFSAPSVPTPAGQTGSAVAKPLRLGLLTALVIGSMIGSGVFSLPQNMASGAGAAAVLIGWLITGVGMLMLAFVY
QTLTTRKPELDNGIYAYARASAGEFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYFFPIFGDGNTPAAVLGASIALWIMH
AVILRGVRSAAVLNAITTVAKVIPLLLFIVLAAIAFRSHVIAQDFWGNAKLGSVFTQVKSTMLITVWVFIGIEGASVFSA
RAQRREDIGRATLLGFVVVLLLLMAVSLLSLGIVPQGELAAMKNPSMAGVLDKAVGAWGAVLISIGLLVSVGGALLAWTL
LAAETLFTPANGGVMPKFLARENSHGVPANALWVTNGLVQLFLIITLVSNATYQALISLATSMILIPYLFSAVYATGIAM
RGEGYAPAEGARTRDMLIGAAATVYCCWLLYAAGPKYLLLSALLYAPGVLLYGWAKRERGARLFKPFEAVILAALLILAA
VAAWLLSTGALGL
>Mature_493_residues
MKNLADSFSAPSVPTPAGQTGSAVAKPLRLGLLTALVIGSMIGSGVFSLPQNMASGAGAAAVLIGWLITGVGMLMLAFVY
QTLTTRKPELDNGIYAYARASAGEFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYFFPIFGDGNTPAAVLGASIALWIMH
AVILRGVRSAAVLNAITTVAKVIPLLLFIVLAAIAFRSHVIAQDFWGNAKLGSVFTQVKSTMLITVWVFIGIEGASVFSA
RAQRREDIGRATLLGFVVVLLLLMAVSLLSLGIVPQGELAAMKNPSMAGVLDKAVGAWGAVLISIGLLVSVGGALLAWTL
LAAETLFTPANGGVMPKFLARENSHGVPANALWVTNGLVQLFLIITLVSNATYQALISLATSMILIPYLFSAVYATGIAM
RGEGYAPAEGARTRDMLIGAAATVYCCWLLYAAGPKYLLLSALLYAPGVLLYGWAKRERGARLFKPFEAVILAALLILAA
VAAWLLSTGALGL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=467, Percent_Identity=47.7516059957173, Blast_Score=404, Evalue=1e-114,
Organism=Escherichia coli, GI2367353, Length=426, Percent_Identity=30.7511737089202, Blast_Score=165, Evalue=8e-42,
Organism=Escherichia coli, GI1790575, Length=378, Percent_Identity=28.8359788359788, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786908, Length=438, Percent_Identity=26.027397260274, Blast_Score=102, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51618; Mature: 51618

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLADSFSAPSVPTPAGQTGSAVAKPLRLGLLTALVIGSMIGSGVFSLPQNMASGAGAA
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH
AVLIGWLITGVGMLMLAFVYQTLTTRKPELDNGIYAYARASAGEFVGFNSAWGYWVSAWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
GNVGYLVIVFGTLGYFFPIFGDGNTPAAVLGASIALWIMHAVILRGVRSAAVLNAITTVA
CCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIPLLLFIVLAAIAFRSHVIAQDFWGNAKLGSVFTQVKSTMLITVWVFIGIEGASVFSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RAQRREDIGRATLLGFVVVLLLLMAVSLLSLGIVPQGELAAMKNPSMAGVLDKAVGAWGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHH
VLISIGLLVSVGGALLAWTLLAAETLFTPANGGVMPKFLARENSHGVPANALWVTNGLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
LFLIITLVSNATYQALISLATSMILIPYLFSAVYATGIAMRGEGYAPAEGARTRDMLIGA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
AATVYCCWLLYAAGPKYLLLSALLYAPGVLLYGWAKRERGARLFKPFEAVILAALLILAA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAWLLSTGALGL
HHHHHHHCCCCCC
>Mature Secondary Structure
MKNLADSFSAPSVPTPAGQTGSAVAKPLRLGLLTALVIGSMIGSGVFSLPQNMASGAGAA
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH
AVLIGWLITGVGMLMLAFVYQTLTTRKPELDNGIYAYARASAGEFVGFNSAWGYWVSAWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
GNVGYLVIVFGTLGYFFPIFGDGNTPAAVLGASIALWIMHAVILRGVRSAAVLNAITTVA
CCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIPLLLFIVLAAIAFRSHVIAQDFWGNAKLGSVFTQVKSTMLITVWVFIGIEGASVFSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RAQRREDIGRATLLGFVVVLLLLMAVSLLSLGIVPQGELAAMKNPSMAGVLDKAVGAWGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHH
VLISIGLLVSVGGALLAWTLLAAETLFTPANGGVMPKFLARENSHGVPANALWVTNGLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
LFLIITLVSNATYQALISLATSMILIPYLFSAVYATGIAMRGEGYAPAEGARTRDMLIGA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
AATVYCCWLLYAAGPKYLLLSALLYAPGVLLYGWAKRERGARLFKPFEAVILAALLILAA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAWLLSTGALGL
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2158926; 10984043; 1311296 [H]