| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ygcG [H]
Identifier: 91783908
GI number: 91783908
Start: 2824147
End: 2825004
Strand: Reverse
Name: ygcG [H]
Synonym: Bxe_A1903
Alternate gene names: 91783908
Gene position: 2825004-2824147 (Counterclockwise)
Preceding gene: 91783909
Following gene: 91783907
Centisome position: 57.7
GC content: 67.83
Gene sequence:
>858_bases TTGAACATCCTGAAGCTGACCGGCACGCTGCTGCTTGTCCTCTGCGCCTTCCTGCCGCCCGGCGCGGGCGCGGAAGTGCC GATTCCGGCGCTGAGCGCGCATGTCACCGACGAGACCGGCACCCTCGCGGACGACCAGCGCGCTTCGCTCGAACAGACCT TGCAAGCGTTCGAGACGAAAAAGGGAAGCCAGATTTCCGTGCTCATGGTGCCTACCACCGCGCCGGAGACCATCGAGCAA TATTCGCTTCGCGTCGTCGAGCAATGGAAGCTGGGCCGCAAAAACGTCGATGACGGCGTGCTGCTGATCATTGCGAAGAA CGACCGGACGCTTCGCATCGAAGTGGGCTACGGCCTCGAAGGCGCGCTCACCGACGCAACGAGCAGTCGCATCATCAACG AGACGATCGTTCCGCGGTTCAGACAGGGTGATTACTACGGCGGCGTCGCGGCCGGTGTCGACAGCATCATGCGTGTGGTC GACGGCGAGCCTTTACCCGCGCCGGATCAGCGTGCCAGCGGCTCAACGCGGTTCGGGCGCTATCTGCCGGTTCTTTTCGT GCTGACCCTGGTGGCGGGCGGTGTCTTGCGCGTGTTGCTGGGGCGGCTGCCCGGCGCCGTCGTGACCGGGGGCGCCGTCG CGGTGGTTGCGTGGATGCTGTCGGGCGCGCTGCTGATCGCGATCGCCGCCGGTGTGATCGCGCTCGCGTTTACGCTGCTC GGCAGCGGTCTCGGCGCCAGCGCCGGCGCGCGCGTGATCGGCGGGCAGTCCGGAAGGCTCGGCGGCGGTTCCGGCCGCGA TATCTTCCGGGGCGGCGGTGGCGGATTCGGCGGCGGCGGCGCGTCGGGCAGGTGGTAG
Upstream 100 bases:
>100_bases AAGAGAAACCTAACTTTTCGGTCACGAACGAAGCGGAGATCGCCCGCCCGCCGCAGGTCGATTTCAACACGGCGCCCACG CCGGCCAGCGGAGCGGCAAA
Downstream 100 bases:
>100_bases CCATGAATCTCGAACGCATCAGCAGACATCTGTTCCTGACCCGCTGGCATGTGAACCGGGCCTTTCCGGTCCCGGTGCTG CGGGCCATCGACAAAGCCGT
Product: putative glycine rich membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNILKLTGTLLLVLCAFLPPGAGAEVPIPALSAHVTDETGTLADDQRASLEQTLQAFETKKGSQISVLMVPTTAPETIEQ YSLRVVEQWKLGRKNVDDGVLLIIAKNDRTLRIEVGYGLEGALTDATSSRIINETIVPRFRQGDYYGGVAAGVDSIMRVV DGEPLPAPDQRASGSTRFGRYLPVLFVLTLVAGGVLRVLLGRLPGAVVTGGAVAVVAWMLSGALLIAIAAGVIALAFTLL GSGLGASAGARVIGGQSGRLGGGSGRDIFRGGGGGFGGGGASGRW
Sequences:
>Translated_285_residues MNILKLTGTLLLVLCAFLPPGAGAEVPIPALSAHVTDETGTLADDQRASLEQTLQAFETKKGSQISVLMVPTTAPETIEQ YSLRVVEQWKLGRKNVDDGVLLIIAKNDRTLRIEVGYGLEGALTDATSSRIINETIVPRFRQGDYYGGVAAGVDSIMRVV DGEPLPAPDQRASGSTRFGRYLPVLFVLTLVAGGVLRVLLGRLPGAVVTGGAVAVVAWMLSGALLIAIAAGVIALAFTLL GSGLGASAGARVIGGQSGRLGGGSGRDIFRGGGGGFGGGGASGRW >Mature_285_residues MNILKLTGTLLLVLCAFLPPGAGAEVPIPALSAHVTDETGTLADDQRASLEQTLQAFETKKGSQISVLMVPTTAPETIEQ YSLRVVEQWKLGRKNVDDGVLLIIAKNDRTLRIEVGYGLEGALTDATSSRIINETIVPRFRQGDYYGGVAAGVDSIMRVV DGEPLPAPDQRASGSTRFGRYLPVLFVLTLVAGGVLRVLLGRLPGAVVTGGAVAVVAWMLSGALLIAIAAGVIALAFTLL GSGLGASAGARVIGGQSGRLGGGSGRDIFRGGGGGFGGGGASGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=147, Percent_Identity=37.4149659863946, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29250; Mature: 29250
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILKLTGTLLLVLCAFLPPGAGAEVPIPALSAHVTDETGTLADDQRASLEQTLQAFETK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHCC KGSQISVLMVPTTAPETIEQYSLRVVEQWKLGRKNVDDGVLLIIAKNDRTLRIEVGYGLE CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCC GALTDATSSRIINETIVPRFRQGDYYGGVAAGVDSIMRVVDGEPLPAPDQRASGSTRFGR CCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH YLPVLFVLTLVAGGVLRVLLGRLPGAVVTGGAVAVVAWMLSGALLIAIAAGVIALAFTLL HHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSGLGASAGARVIGGQSGRLGGGSGRDIFRGGGGGFGGGGASGRW HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNILKLTGTLLLVLCAFLPPGAGAEVPIPALSAHVTDETGTLADDQRASLEQTLQAFETK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHCC KGSQISVLMVPTTAPETIEQYSLRVVEQWKLGRKNVDDGVLLIIAKNDRTLRIEVGYGLE CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCC GALTDATSSRIINETIVPRFRQGDYYGGVAAGVDSIMRVVDGEPLPAPDQRASGSTRFGR CCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH YLPVLFVLTLVAGGVLRVLLGRLPGAVVTGGAVAVVAWMLSGALLIAIAAGVIALAFTLL HHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSGLGASAGARVIGGQSGRLGGGSGRDIFRGGGGGFGGGGASGRW HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]