| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ybhG [C]
Identifier: 91783897
GI number: 91783897
Start: 2812854
End: 2813867
Strand: Direct
Name: ybhG [C]
Synonym: Bxe_A1914
Alternate gene names: 91783897
Gene position: 2812854-2813867 (Clockwise)
Preceding gene: 91783888
Following gene: 91783898
Centisome position: 57.45
GC content: 63.41
Gene sequence:
>1014_bases ATGCAGTTCAAACGAACGAAAAATATGGACCTATCGAAACACCGCACGCAGGCGCTGCTCGTGCTGGTCGCCGTCACGGC AGCCGGCATCGTGGCGTGGCGCTGGCCGGTGCTGTTCGGCTCGCATGCCGATACGACTCATATCGTGGTGTCCGGCAACA TCGAGGCCCACGAAAGTGTCCTGAGCGTCACTCAGGTGCAGGCACCCATTGTTTATCTGCCTTTCGACGAAGGCGCTTAT GTCCGACGCGGCACCGTGCTCGCGCGCGTCGACGATCGCCTGTATCGCCAGCAGACGGAAATCGACCGTACCAATCTGCA GGTGGCCACGGCGCAGATCAGCGCCAATGAAAGCACCCTGGCCGCGGCACGCAACAATGTCGTCAGCGATCAGTTCGATC TCAGCGAAAAGCAGCTCGACCTGGGGCGGGCGGAAAACCTGGTGAAGGGCAACGCCATTGCGCGCCAGACGCGCGACCTC GCCTTCACCGCCGAACGGCAATCCGCCGCGACGCTGGCGCACGACAAGGCGCTGGTGGAAGTCGCGAGCAACAACATCGC GCTCGCGCGCGCGAACCAGGCCGCGGCGGATGCGAAGCTCAAGCTCGACGAAGTCATGCTCTCCTACACGGTGCTGCGCG CGCCATTCGACGGCGTGATCGCGGTACGCGAGGCGGAGCTCGGCCAGCTCGCGGGATCGGGCGTCGCCATCTTCACGCTA GATGAACTCGATCACGTCTGGCTGCGCGCGTATGTGAACGAGCCGGATATCGGCAAGGTTCGTCTCAACGAGGCCGTCAC CGTGACCACCGACACCTACCCCGGCAAGACGTATCACGGACGCATCAGCTTCATTTCTCCGCAGGCCGAATTCACGCCCA AAACGGTCGAGACGCACGCCGAGCGCGTGACGCTCGTCTATCGGGTTCGCATCGATATCGACAACCCCACGCACGAACTG CTGCCGGGCATGCCGGCCGATGCGTCGATCGCCTTGCTGGCGCCCGGCAAATGA
Upstream 100 bases:
>100_bases AACTTGACCTGAGTCAATTGGCCGGACGGGCAGCGGCTCTATCTTCAGCAAACGCAACATAGATAGCCTCGCGATCTCCG GCTTCGCCTTCTCCATCCGG
Downstream 100 bases:
>100_bases GCACCGCCGCGGCCGTGACCGCGATCCATGTACGCGACCTGGTCCGCAGTTTCGGGGCCGTGCAGGCGGTGCGCGGTGTC AGCCTCGATATCGAGCGCGG
Product: multidrug ABC transporter membrane-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MQFKRTKNMDLSKHRTQALLVLVAVTAAGIVAWRWPVLFGSHADTTHIVVSGNIEAHESVLSVTQVQAPIVYLPFDEGAY VRRGTVLARVDDRLYRQQTEIDRTNLQVATAQISANESTLAAARNNVVSDQFDLSEKQLDLGRAENLVKGNAIARQTRDL AFTAERQSAATLAHDKALVEVASNNIALARANQAAADAKLKLDEVMLSYTVLRAPFDGVIAVREAELGQLAGSGVAIFTL DELDHVWLRAYVNEPDIGKVRLNEAVTVTTDTYPGKTYHGRISFISPQAEFTPKTVETHAERVTLVYRVRIDIDNPTHEL LPGMPADASIALLAPGK
Sequences:
>Translated_337_residues MQFKRTKNMDLSKHRTQALLVLVAVTAAGIVAWRWPVLFGSHADTTHIVVSGNIEAHESVLSVTQVQAPIVYLPFDEGAY VRRGTVLARVDDRLYRQQTEIDRTNLQVATAQISANESTLAAARNNVVSDQFDLSEKQLDLGRAENLVKGNAIARQTRDL AFTAERQSAATLAHDKALVEVASNNIALARANQAAADAKLKLDEVMLSYTVLRAPFDGVIAVREAELGQLAGSGVAIFTL DELDHVWLRAYVNEPDIGKVRLNEAVTVTTDTYPGKTYHGRISFISPQAEFTPKTVETHAERVTLVYRVRIDIDNPTHEL LPGMPADASIALLAPGK >Mature_337_residues MQFKRTKNMDLSKHRTQALLVLVAVTAAGIVAWRWPVLFGSHADTTHIVVSGNIEAHESVLSVTQVQAPIVYLPFDEGAY VRRGTVLARVDDRLYRQQTEIDRTNLQVATAQISANESTLAAARNNVVSDQFDLSEKQLDLGRAENLVKGNAIARQTRDL AFTAERQSAATLAHDKALVEVASNNIALARANQAAADAKLKLDEVMLSYTVLRAPFDGVIAVREAELGQLAGSGVAIFTL DELDHVWLRAYVNEPDIGKVRLNEAVTVTTDTYPGKTYHGRISFISPQAEFTPKTVETHAERVTLVYRVRIDIDNPTHEL LPGMPADASIALLAPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=294, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1789900, Length=319, Percent_Identity=28.5266457680251, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790519, Length=235, Percent_Identity=27.2340425531915, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 36884; Mature: 36884
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFKRTKNMDLSKHRTQALLVLVAVTAAGIVAWRWPVLFGSHADTTHIVVSGNIEAHESV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEECCCHHHHHH LSVTQVQAPIVYLPFDEGAYVRRGTVLARVDDRLYRQQTEIDRTNLQVATAQISANESTL HHHHHHCCCEEEEECCCCCEEECCEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH AAARNNVVSDQFDLSEKQLDLGRAENLVKGNAIARQTRDLAFTAERQSAATLAHDKALVE HHHHCCCCCCCCCCCHHHHCCCHHHCHHCCCHHHHHHHCEEEEECCCHHHHHHHHHEEEE VASNNIALARANQAAADAKLKLDEVMLSYTVLRAPFDGVIAVREAELGQLAGSGVAIFTL ECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEEE DELDHVWLRAYVNEPDIGKVRLNEAVTVTTDTYPGKTYHGRISFISPQAEFTPKTVETHA CCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHCC ERVTLVYRVRIDIDNPTHELLPGMPADASIALLAPGK CEEEEEEEEEEECCCCHHHHCCCCCCCCEEEEEECCC >Mature Secondary Structure MQFKRTKNMDLSKHRTQALLVLVAVTAAGIVAWRWPVLFGSHADTTHIVVSGNIEAHESV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEECCCHHHHHH LSVTQVQAPIVYLPFDEGAYVRRGTVLARVDDRLYRQQTEIDRTNLQVATAQISANESTL HHHHHHCCCEEEEECCCCCEEECCEEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCHHH AAARNNVVSDQFDLSEKQLDLGRAENLVKGNAIARQTRDLAFTAERQSAATLAHDKALVE HHHHCCCCCCCCCCCHHHHCCCHHHCHHCCCHHHHHHHCEEEEECCCHHHHHHHHHEEEE VASNNIALARANQAAADAKLKLDEVMLSYTVLRAPFDGVIAVREAELGQLAGSGVAIFTL ECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEEE DELDHVWLRAYVNEPDIGKVRLNEAVTVTTDTYPGKTYHGRISFISPQAEFTPKTVETHA CCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHCC ERVTLVYRVRIDIDNPTHELLPGMPADASIALLAPGK CEEEEEEEEEEECCCCHHHHCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA