| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783885
Identifier: 91783885
GI number: 91783885
Start: 2802994
End: 2803944
Strand: Reverse
Name: 91783885
Synonym: Bxe_A1926
Alternate gene names: NA
Gene position: 2803944-2802994 (Counterclockwise)
Preceding gene: 91783886
Following gene: 91783884
Centisome position: 57.27
GC content: 62.88
Gene sequence:
>951_bases ATGCCACTCGACCCGAACTACCCACGCGATCTGACCGGCTACGGCCGCCACCCGGTGCAGGCCAACTGGCCGGGGCAAGC GCGTGTCGCGGTGCAATTCGTCCTGAACTACGAAGAAGGCGGTGAAAACTGCGTGTTGCACGGCGATCCCGGCTCGGAGC AGTTCCTGTCGGAAATCGTCGGCGCCGCGGCTTATCCGGCTCGCCACATGAGCATGGAGTCGATCTACGAATACGGCTCG CGCGCGGGTGTGTGGCGCATCCTGCGCGAATTCGAAAAGCGCGGCCTGCCGCTTACGGTGTTCGGCGTAGGTATGGCGAT CGAACGGCATCCGGAACTGGCGCGCGCCTTCGTGGAACTCGGCCATGAGATCGCCTGCCACGGCTATCGCTGGATTCACT ATCAGGACGTGTCGCCGGAGAAAGAAGCGGAGCACATGCGTCTGGGCATGGCCGCGATCGAACGCGTGACAGGCGAGCGT CCGCTCGGCTGGTACACCGGTCGCGACAGTCCCAATACGCGTCGTCTGGTCGCCGAATACGGCGGTTTCCTCTACGACTC GGACTACTACGGCGACGATCTGCCGTTCTGGATGGACGTGGGCGTTACCGGCGGCGCGACGGTGCCGCAACTGATCGTGC CGTACACGCTCGACACCAACGACATGCGCTTTGCCAGCCCGCAAGGCTTCAACACGGCGGACCACTTCTTCACGTATCTG CGCGATGCATTCGACGTGCTCTACGAAGAAGGCGACGAAGCGCCGAAGATGCTGTCCATCGGCATGCATTGCCGTCTGCT TGGCCGGCCTGGTCGTTTTCGCGCGCTGCAACGTTTTCTCGATCATATCGAACAGCACGATCGCGTGTGGGTGACGCGGC GCGTCGACATTGCGCTCCACTGGCGCGAACATCATCCTTACCAACGAGACAACCGCGGGGCAGCGGCATGA
Upstream 100 bases:
>100_bases GCGCGAGATATACGCAGCATGCATCTCGCGCCAGCCCCACGTGCCTGCCGCGTGAGTTCCACGCGAATTTTACGTACCAT CACCACGCATTCGTCAAACC
Downstream 100 bases:
>100_bases AGGCGATGCAATACACTCTGGACCAACTCAACAGTATCTCGACCGACGCGTTCGTGGCAGCGCTGTCGGGCATTTTCGAG CACTCGCCGTGGGTCGCGGA
Product: putative polysaccharide deacetylase
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPLDPNYPRDLTGYGRHPVQANWPGQARVAVQFVLNYEEGGENCVLHGDPGSEQFLSEIVGAAAYPARHMSMESIYEYGS RAGVWRILREFEKRGLPLTVFGVGMAIERHPELARAFVELGHEIACHGYRWIHYQDVSPEKEAEHMRLGMAAIERVTGER PLGWYTGRDSPNTRRLVAEYGGFLYDSDYYGDDLPFWMDVGVTGGATVPQLIVPYTLDTNDMRFASPQGFNTADHFFTYL RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIEQHDRVWVTRRVDIALHWREHHPYQRDNRGAAA
Sequences:
>Translated_316_residues MPLDPNYPRDLTGYGRHPVQANWPGQARVAVQFVLNYEEGGENCVLHGDPGSEQFLSEIVGAAAYPARHMSMESIYEYGS RAGVWRILREFEKRGLPLTVFGVGMAIERHPELARAFVELGHEIACHGYRWIHYQDVSPEKEAEHMRLGMAAIERVTGER PLGWYTGRDSPNTRRLVAEYGGFLYDSDYYGDDLPFWMDVGVTGGATVPQLIVPYTLDTNDMRFASPQGFNTADHFFTYL RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIEQHDRVWVTRRVDIALHWREHHPYQRDNRGAAA >Mature_315_residues PLDPNYPRDLTGYGRHPVQANWPGQARVAVQFVLNYEEGGENCVLHGDPGSEQFLSEIVGAAAYPARHMSMESIYEYGSR AGVWRILREFEKRGLPLTVFGVGMAIERHPELARAFVELGHEIACHGYRWIHYQDVSPEKEAEHMRLGMAAIERVTGERP LGWYTGRDSPNTRRLVAEYGGFLYDSDYYGDDLPFWMDVGVTGGATVPQLIVPYTLDTNDMRFASPQGFNTADHFFTYLR DAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIEQHDRVWVTRRVDIALHWREHHPYQRDNRGAAA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36201; Mature: 36070
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDPNYPRDLTGYGRHPVQANWPGQARVAVQFVLNYEEGGENCVLHGDPGSEQFLSEIV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH GAAAYPARHMSMESIYEYGSRAGVWRILREFEKRGLPLTVFGVGMAIERHPELARAFVEL HHHCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH GHEIACHGYRWIHYQDVSPEKEAEHMRLGMAAIERVTGERPLGWYTGRDSPNTRRLVAEY CCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHH GGFLYDSDYYGDDLPFWMDVGVTGGATVPQLIVPYTLDTNDMRFASPQGFNTADHFFTYL CCEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHH RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIEQHDRVWVTRRVDIALH HHHHHHHHHCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEE WREHHPYQRDNRGAAA EHHCCCCCCCCCCCCC >Mature Secondary Structure PLDPNYPRDLTGYGRHPVQANWPGQARVAVQFVLNYEEGGENCVLHGDPGSEQFLSEIV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH GAAAYPARHMSMESIYEYGSRAGVWRILREFEKRGLPLTVFGVGMAIERHPELARAFVEL HHHCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH GHEIACHGYRWIHYQDVSPEKEAEHMRLGMAAIERVTGERPLGWYTGRDSPNTRRLVAEY CCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHH GGFLYDSDYYGDDLPFWMDVGVTGGATVPQLIVPYTLDTNDMRFASPQGFNTADHFFTYL CCEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHH RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIEQHDRVWVTRRVDIALH HHHHHHHHHCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEE WREHHPYQRDNRGAAA EHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA