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The map label for this gene is alc1 [H]

Identifier: 91783883

GI number: 91783883

Start: 2801390

End: 2802403

Strand: Reverse

Name: alc1 [H]

Synonym: Bxe_A1928

Alternate gene names: 91783883

Gene position: 2802403-2801390 (Counterclockwise)

Preceding gene: 91783884

Following gene: 91783882

Centisome position: 57.24

GC content: 63.81

Gene sequence:

>1014_bases
ATGGCACTCCCGATTCTCGACCCCAACGCACCGGAATTCACGCGCCGCTATGTGAACCTGGCGGACCCGCGTCTGGGCGC
GCAGGCGCTCGAGGCCAGCGACGATTTCTTCGCACCGAAGGAGCGCATGCTGAATCCGGAGCCGGCCGTTTTCATTCCGG
GCAAGTACGACGACAACGGCAAATGGATGGACGGCTGGGAAACGCGCCGCAAGCGCGTCACCGGCTATGACTGGTGCGTG
GTGAAGCTGGCGCGTCCGGGTGTGATCAAGGGACTGGATCTCGACACCAGCCACTTCACGGGTAATTTCCCGCCGGCGGC
GTCGGTGGAAGCCGCGCGCGTGGTGGACGGCGTGCCGAATCAGTCGACACAGTGGACCGAAATCGTTGCGTCGACCACGT
TGCAGGGCAATAGCCACCACTATCATGAAGTCAGCGACGCGAACGCGTACACGCACCTGCGCGTGAATATCTACCCGGAC
GGCGGTATCGCGCGTCTGCGTGTGTATGGTCAGCCGCAAGTGGACTGGGCCGGCGCGAGCCGCACCGAGCAGTTCGACCT
GGCCGCGATGGAAAACGGCGCGTATCTGGTCGCCGCGAACAACCAGCACTTCGGCGCCGCGTCGACGATTCTGATGCCGG
GCCGCGGCGTGAACATGGGCGACGGCTGGGAGACGCGCCGCCGTCGCGAGCCGGGTAATGACTGGGCGATCGTCGCGCTG
GCGCAGCCGGGCGTGATCAGGAAGATCGAAGTCGATACGGCGCATTTCAAGGGCAACTATCCGGACCGCTGCTCGATTCA
GGCCGCGTACGTGACGGGCGGCACGGACAGTTCGCTGATCACGCAAGCCATGTTCTGGCCGGTGCTGCTCGGCGAACAGA
AGCTGAAGATGGACAACCAGCATTATTTCGAAAGCGAAATCGCGGCACTGGGTCCGGTGACGCACGTACGCTTCAATATC
ATTCCGGACGGCGGCGTGTCGCGTCTGCGTCTGTGGGGCACGCTCGCATCATGA

Upstream 100 bases:

>100_bases
CCGGCTCGACGACCTGATCGACGCGTGAGGTTCAACCACGCGTCGCGAACATCGAACCGAAACGTTTTCTCCGCACTGGC
AAATATCAAGGAAGACAAAA

Downstream 100 bases:

>100_bases
AAACGCTCGCGATCGAACCGTTGAAGAAAGAAGCGTTCGCCGCATTCGGCGACGTGATCGAACTCGAAGGCGCGAAGCAG
ATCTCGATCAACCTCGGCAC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 1 [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MALPILDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDNGKWMDGWETRRKRVTGYDWCV
VKLARPGVIKGLDLDTSHFTGNFPPAASVEAARVVDGVPNQSTQWTEIVASTTLQGNSHHYHEVSDANAYTHLRVNIYPD
GGIARLRVYGQPQVDWAGASRTEQFDLAAMENGAYLVAANNQHFGAASTILMPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIRKIEVDTAHFKGNYPDRCSIQAAYVTGGTDSSLITQAMFWPVLLGEQKLKMDNQHYFESEIAALGPVTHVRFNI
IPDGGVSRLRLWGTLAS

Sequences:

>Translated_337_residues
MALPILDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDNGKWMDGWETRRKRVTGYDWCV
VKLARPGVIKGLDLDTSHFTGNFPPAASVEAARVVDGVPNQSTQWTEIVASTTLQGNSHHYHEVSDANAYTHLRVNIYPD
GGIARLRVYGQPQVDWAGASRTEQFDLAAMENGAYLVAANNQHFGAASTILMPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIRKIEVDTAHFKGNYPDRCSIQAAYVTGGTDSSLITQAMFWPVLLGEQKLKMDNQHYFESEIAALGPVTHVRFNI
IPDGGVSRLRLWGTLAS
>Mature_336_residues
ALPILDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDNGKWMDGWETRRKRVTGYDWCVV
KLARPGVIKGLDLDTSHFTGNFPPAASVEAARVVDGVPNQSTQWTEIVASTTLQGNSHHYHEVSDANAYTHLRVNIYPDG
GIARLRVYGQPQVDWAGASRTEQFDLAAMENGAYLVAANNQHFGAASTILMPGRGVNMGDGWETRRRREPGNDWAIVALA
QPGVIRKIEVDTAHFKGNYPDRCSIQAAYVTGGTDSSLITQAMFWPVLLGEQKLKMDNQHYFESEIAALGPVTHVRFNII
PDGGVSRLRLWGTLAS

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=369, Percent_Identity=39.0243902439024, Blast_Score=257, Evalue=9e-69,
Organism=Saccharomyces cerevisiae, GI6322220, Length=330, Percent_Identity=36.3636363636364, Blast_Score=217, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 37251; Mature: 37120

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPILDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDNG
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRVTGYDWCVVKLARPGVIKGLDLDTSHFTGNFPPAASVEAARVVDGVPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCC
QSTQWTEIVASTTLQGNSHHYHEVSDANAYTHLRVNIYPDGGIARLRVYGQPQVDWAGAS
CCCHHHEEEEEEEECCCCCCEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCC
RTEQFDLAAMENGAYLVAANNQHFGAASTILMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKIEVDTAHFKGNYPDRCSIQAAYVTGGTDSSLITQAMFWPVLLGEQKLKMDNQ
ECCCEEEEEEECEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHCCCCC
HYFESEIAALGPVTHVRFNIIPDGGVSRLRLWGTLAS
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
ALPILDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDNG
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRVTGYDWCVVKLARPGVIKGLDLDTSHFTGNFPPAASVEAARVVDGVPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCC
QSTQWTEIVASTTLQGNSHHYHEVSDANAYTHLRVNIYPDGGIARLRVYGQPQVDWAGAS
CCCHHHEEEEEEEECCCCCCEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCC
RTEQFDLAAMENGAYLVAANNQHFGAASTILMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKIEVDTAHFKGNYPDRCSIQAAYVTGGTDSSLITQAMFWPVLLGEQKLKMDNQ
ECCCEEEEEEECEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHCCCCC
HYFESEIAALGPVTHVRFNIIPDGGVSRLRLWGTLAS
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA