Click here to switch to the map view.

The map label for this gene is ompW [C]

Identifier: 91783865

GI number: 91783865

Start: 2783097

End: 2783753

Strand: Reverse

Name: ompW [C]

Synonym: Bxe_A1946

Alternate gene names: 91783865

Gene position: 2783753-2783097 (Counterclockwise)

Preceding gene: 91783866

Following gene: 91783861

Centisome position: 56.86

GC content: 61.19

Gene sequence:

>657_bases
ATGAAGCACTCGTTGAGGAACCGATTCAAAGCCGCCGCCATCGTTTCGAGCCTGCTGTGCGCGGGCGCTTTTGCCTCGCA
GGCGCATGCCGAGGGCGATGATACGATGAACGGCATTCATGCCGGCGACGTGCTGGTGCGGCTGCGCGCCATCAGCATCA
TGCCGAACGTGAGCACCACCCAATCGCTGTCGGCGCTCAACGTGGACGTGAACAACGCGATCATGCCGGAACTGGATCTG
ACCTATATGATCCGCGATTACCTCGGCGTCGAACTGATTCTCGCCACCTCGCGGCATCAGCTGACCTCGAGCCTCGGCAA
TCTCGGTGGCGTGAACGTGCTGCCGCCTACGCTGTTGCTGCAATATCACTTCAACCATGCGGGACGCATTCGTCCGTATC
TGGGCGCCGGTCTCAACTACACGCTGTTTTACAACAACGGCCTGAACGCGGGCGGCCAGTCGATCGGGATTACCAACCAT
AGCTGGGGCCCGGCGCTGCAGGCCGGTGTCGACGTTCAGGTGACCAAGACGTTGTTCGTCAACGCGGACATCAAGAAAAT
CTGGATGCATACGGATGCCACGCTCGGCGGCCAGCCGCTGGGTCGCCTGAGCATCGATCCGGTGGTGGTCGGCCTGGGTG
TCGGGATGCGCTTCTGA

Upstream 100 bases:

>100_bases
GCAGGGCGATGGGCATTCTCGCTGATTTGATACGCGTCAACATGTCGCGCGACGGGAACTTCGACAATTCCGACACGCAA
ACAAATACTTGGGGAAGCAC

Downstream 100 bases:

>100_bases
TTTCGCGCGTTGCTTGCGCGCACAACCAGCGGTGTGTCGCCACGTAAAAAAACGCCGGATCCGGCGTTTTTTGCGCTTCG
GGTTGACCGCGGCGTTGCCT

Product: OmpW family outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKHSLRNRFKAAAIVSSLLCAGAFASQAHAEGDDTMNGIHAGDVLVRLRAISIMPNVSTTQSLSALNVDVNNAIMPELDL
TYMIRDYLGVELILATSRHQLTSSLGNLGGVNVLPPTLLLQYHFNHAGRIRPYLGAGLNYTLFYNNGLNAGGQSIGITNH
SWGPALQAGVDVQVTKTLFVNADIKKIWMHTDATLGGQPLGRLSIDPVVVGLGVGMRF

Sequences:

>Translated_218_residues
MKHSLRNRFKAAAIVSSLLCAGAFASQAHAEGDDTMNGIHAGDVLVRLRAISIMPNVSTTQSLSALNVDVNNAIMPELDL
TYMIRDYLGVELILATSRHQLTSSLGNLGGVNVLPPTLLLQYHFNHAGRIRPYLGAGLNYTLFYNNGLNAGGQSIGITNH
SWGPALQAGVDVQVTKTLFVNADIKKIWMHTDATLGGQPLGRLSIDPVVVGLGVGMRF
>Mature_218_residues
MKHSLRNRFKAAAIVSSLLCAGAFASQAHAEGDDTMNGIHAGDVLVRLRAISIMPNVSTTQSLSALNVDVNNAIMPELDL
TYMIRDYLGVELILATSRHQLTSSLGNLGGVNVLPPTLLLQYHFNHAGRIRPYLGAGLNYTLFYNNGLNAGGQSIGITNH
SWGPALQAGVDVQVTKTLFVNADIKKIWMHTDATLGGQPLGRLSIDPVVVGLGVGMRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=219, Percent_Identity=34.2465753424658, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 23331; Mature: 23331

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSLRNRFKAAAIVSSLLCAGAFASQAHAEGDDTMNGIHAGDVLVRLRAISIMPNVSTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCC
QSLSALNVDVNNAIMPELDLTYMIRDYLGVELILATSRHQLTSSLGNLGGVNVLPPTLLL
CCCEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCHHEEE
QYHFNHAGRIRPYLGAGLNYTLFYNNGLNAGGQSIGITNHSWGPALQAGVDVQVTKTLFV
EEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHCCCCEEEEEEEEE
NADIKKIWMHTDATLGGQPLGRLSIDPVVVGLGVGMRF
ECCCEEEEEECCCCCCCCCCCCEECCEEEEEECCCCCC
>Mature Secondary Structure
MKHSLRNRFKAAAIVSSLLCAGAFASQAHAEGDDTMNGIHAGDVLVRLRAISIMPNVSTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCC
QSLSALNVDVNNAIMPELDLTYMIRDYLGVELILATSRHQLTSSLGNLGGVNVLPPTLLL
CCCEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCHHEEE
QYHFNHAGRIRPYLGAGLNYTLFYNNGLNAGGQSIGITNHSWGPALQAGVDVQVTKTLFV
EEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHCCCCEEEEEEEEE
NADIKKIWMHTDATLGGQPLGRLSIDPVVVGLGVGMRF
ECCCEEEEEECCCCCCCCCCCCEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]