| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pldA [C]
Identifier: 91783863
GI number: 91783863
Start: 2781227
End: 2782585
Strand: Direct
Name: pldA [C]
Synonym: Bxe_A1948
Alternate gene names: 91783863
Gene position: 2781227-2782585 (Clockwise)
Preceding gene: 91783862
Following gene: 91783864
Centisome position: 56.81
GC content: 66.45
Gene sequence:
>1359_bases ATGCGCTTTGACGCTTCAATCGACCGCGTTGCCCGCAATGCCGCTTCTCACGCTCGCCGCCCTGTTACGCGCTTTGCACG CTTCGCGCGCTCCGGTCCACGCTTCGGCCGCGCCATGCTGCTGGCTGCGCTCGTTGCCGGCGCGGCGATGTCCGGCCAGG CGCGCGCGACGGTGGCGATGCTGCAACCGCTTCGCGTGGCCGCCGCCAACGAGCCGTTGCAGATCACGATGCTCTACTCC GCCGACGACGCCAAAGCGCTGACCGTCACTGTCCCGCCGACCATTCGCGTGAGCCTGAGCGCGGGCGAGCAGTCGCCGCA GCCGCTCGACCTGCAACGCGAGCCGGGTGTGCCGGGCACGCTGCACCTGCGGCCGGGCCAGTTCCGCAAGGTGCGTTTCT CGGCGCCGTGGCCGGAATCGGCGCGCGGCGAGGTACGCATCGACCCCGTGGGATTCGACGCATCGCCCGCGCTTGTCGCG ATCAATCGCGGGCCGCAGCAGGACGCGATTGCGCAGGCAGAACGCACGGAAGGCCAGGCGAGCACGCCCGCGCAGGCTGC CGCGACGGCGGCAATGGTCGATGGTCCGACCGGCGACGCCATCTCGCCGCCCGGCGACTCGCTCGCCACCACCGGACGCG GCGTGCTCGCCCACCTCTCCTATTACGAGCCGATGTACATCGCCGCGGGCCACAACGGCGACACGAACGCGCGGCTGCAG TTGAGCTTCAAATATCGGATCCGCATACCGGACGATCTGCGCTCGAAGGCGTTTCTCGACAACCTGTATTTCGCCTACAC GCAGACTTCGATCTGGGATCTGTCCGCCGATTCGCGGCCGTTCCGCGACACCACCTACTCGCCGCAACTGTTCTACTACG TGCCGGACACCGGCTGGAAGAGCCCGTTCTTCACCCGCATGGGCTTTGCAGCGGGCGTCGCGCACGAATCGAACGGCAAG GCCGGCGCGGATTCGCGCAGCATCAACATGCCGTTTATCCGGCCGACGTGGGAATTCGGCGATCTGAGCGCCAACCATCT GACCGTGTCGCCGAAGATCTATTACTACGTGGGGACGAGCAGCAACCCGGATATCGCCGACTATCGCGGCTACGTCGATC TGCTGGTCAAATACGGCAGCCCGGACGGCTGGCAGCTGGCGACCACGCTGCGTAAAGGCACCAAACACTGGTACGGCAGC GTGGATACGCAATTCACCTACCCGCTCGCCAGACTGCTGGGCAGCGCGTGGGGCGGCTATCTCTGGGTGGGCTACTTCAA CGGCTATGGCGAGGATCTGCTCGACTACAACAATCGCCAGCACTGGATGGCGCGGATCGGCTACAGCATCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGCTTTCGCGCGATCGATCCGGTTCGCCCGGCATGTGTCGTGGTCCTACGCCTGCCGGCCTCCGTTTCGCTCGTTGCCC TGCTCCCTGGACGACAACCC
Downstream 100 bases:
>100_bases GATGCGCGGACATCGGCTGGGATGCAGGCCGCGCCGCCACGAGACAGGCCGCGGACGCCGCCAGACGCGCGCCAACGGCG GCCTCGCCGTTGGCCACGGC
Product: putative outer membrane phospholipase A
Products: NA
Alternate protein names: Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MRFDASIDRVARNAASHARRPVTRFARFARSGPRFGRAMLLAALVAGAAMSGQARATVAMLQPLRVAAANEPLQITMLYS ADDAKALTVTVPPTIRVSLSAGEQSPQPLDLQREPGVPGTLHLRPGQFRKVRFSAPWPESARGEVRIDPVGFDASPALVA INRGPQQDAIAQAERTEGQASTPAQAAATAAMVDGPTGDAISPPGDSLATTGRGVLAHLSYYEPMYIAAGHNGDTNARLQ LSFKYRIRIPDDLRSKAFLDNLYFAYTQTSIWDLSADSRPFRDTTYSPQLFYYVPDTGWKSPFFTRMGFAAGVAHESNGK AGADSRSINMPFIRPTWEFGDLSANHLTVSPKIYYYVGTSSNPDIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGS VDTQFTYPLARLLGSAWGGYLWVGYFNGYGEDLLDYNNRQHWMARIGYSIAR
Sequences:
>Translated_452_residues MRFDASIDRVARNAASHARRPVTRFARFARSGPRFGRAMLLAALVAGAAMSGQARATVAMLQPLRVAAANEPLQITMLYS ADDAKALTVTVPPTIRVSLSAGEQSPQPLDLQREPGVPGTLHLRPGQFRKVRFSAPWPESARGEVRIDPVGFDASPALVA INRGPQQDAIAQAERTEGQASTPAQAAATAAMVDGPTGDAISPPGDSLATTGRGVLAHLSYYEPMYIAAGHNGDTNARLQ LSFKYRIRIPDDLRSKAFLDNLYFAYTQTSIWDLSADSRPFRDTTYSPQLFYYVPDTGWKSPFFTRMGFAAGVAHESNGK AGADSRSINMPFIRPTWEFGDLSANHLTVSPKIYYYVGTSSNPDIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGS VDTQFTYPLARLLGSAWGGYLWVGYFNGYGEDLLDYNNRQHWMARIGYSIAR >Mature_452_residues MRFDASIDRVARNAASHARRPVTRFARFARSGPRFGRAMLLAALVAGAAMSGQARATVAMLQPLRVAAANEPLQITMLYS ADDAKALTVTVPPTIRVSLSAGEQSPQPLDLQREPGVPGTLHLRPGQFRKVRFSAPWPESARGEVRIDPVGFDASPALVA INRGPQQDAIAQAERTEGQASTPAQAAATAAMVDGPTGDAISPPGDSLATTGRGVLAHLSYYEPMYIAAGHNGDTNARLQ LSFKYRIRIPDDLRSKAFLDNLYFAYTQTSIWDLSADSRPFRDTTYSPQLFYYVPDTGWKSPFFTRMGFAAGVAHESNGK AGADSRSINMPFIRPTWEFGDLSANHLTVSPKIYYYVGTSSNPDIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGS VDTQFTYPLARLLGSAWGGYLWVGYFNGYGEDLLDYNNRQHWMARIGYSIAR
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=192, Percent_Identity=34.8958333333333, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 49597; Mature: 49597
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDASIDRVARNAASHARRPVTRFARFARSGPRFGRAMLLAALVAGAAMSGQARATVAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LQPLRVAAANEPLQITMLYSADDAKALTVTVPPTIRVSLSAGEQSPQPLDLQREPGVPGT HCCHHHHCCCCCEEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEE LHLRPGQFRKVRFSAPWPESARGEVRIDPVGFDASPALVAINRGPQQDAIAQAERTEGQA EEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCC STPAQAAATAAMVDGPTGDAISPPGDSLATTGRGVLAHLSYYEPMYIAAGHNGDTNARLQ CCCHHHHHEEEEECCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEEEECCCCCCCCEEE LSFKYRIRIPDDLRSKAFLDNLYFAYTQTSIWDLSADSRPFRDTTYSPQLFYYVPDTGWK EEEEEEEECCHHHHHHHHHHHEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCC SPFFTRMGFAAGVAHESNGKAGADSRSINMPFIRPTWEFGDLSANHLTVSPKIYYYVGTS CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCEEEEEEECC SNPDIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGSVDTQFTYPLARLLGSAWGGY CCCCHHHHCCEEEEEEECCCCCCHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHCCCCCE LWVGYFNGYGEDLLDYNNRQHWMARIGYSIAR EEEEEECCCCCHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRFDASIDRVARNAASHARRPVTRFARFARSGPRFGRAMLLAALVAGAAMSGQARATVAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LQPLRVAAANEPLQITMLYSADDAKALTVTVPPTIRVSLSAGEQSPQPLDLQREPGVPGT HCCHHHHCCCCCEEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCEE LHLRPGQFRKVRFSAPWPESARGEVRIDPVGFDASPALVAINRGPQQDAIAQAERTEGQA EEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCC STPAQAAATAAMVDGPTGDAISPPGDSLATTGRGVLAHLSYYEPMYIAAGHNGDTNARLQ CCCHHHHHEEEEECCCCCCCCCCCCCCHHCCCCCCEEEECCCCCEEEEECCCCCCCCEEE LSFKYRIRIPDDLRSKAFLDNLYFAYTQTSIWDLSADSRPFRDTTYSPQLFYYVPDTGWK EEEEEEEECCHHHHHHHHHHHEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCC SPFFTRMGFAAGVAHESNGKAGADSRSINMPFIRPTWEFGDLSANHLTVSPKIYYYVGTS CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCEEEEEEECC SNPDIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGSVDTQFTYPLARLLGSAWGGY CCCCHHHHCCEEEEEEECCCCCCHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHCCCCCE LWVGYFNGYGEDLLDYNNRQHWMARIGYSIAR EEEEEECCCCCHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]