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The map label for this gene is rbsC [H]

Identifier: 91783813

GI number: 91783813

Start: 2719693

End: 2720775

Strand: Reverse

Name: rbsC [H]

Synonym: Bxe_A1999

Alternate gene names: 91783813

Gene position: 2720775-2719693 (Counterclockwise)

Preceding gene: 91783814

Following gene: 91783812

Centisome position: 55.57

GC content: 68.14

Gene sequence:

>1083_bases
TTGCCGGAAGCATCGGGCGACAAGCCGGGCGCGGGCCGCACGGATGGTGCAGGTGGTGCAGGCGGCGCAGGCGGCGCGAG
TGGCGCGAGTGGCGCGACACCGCCAGCCGACCCGTCGGCGCCGCTCGCGAGCGGCAAGCCGGCCGGCACGCGCCTGGGCT
TTTCGAATTACCTCGGGCTCGCCGGCGCGTTGCTGGCGATGATCGTGCTGTTCTCGCTGCTGAGTTCGCACTTTCTGACG
TACGACACGTTCAGCACGATCGCCAACCAGATTCCCGATCTGGTGGTGATGTCGGTGGGCATGACTTTCGTGCTGATCAT
CGCCGGGATCGATCTGTCGGTGGGATCGGTGCTGGCGCTGGGTGGGTCGGTGGTGAGCGTGGCCGCGCTGAAGTGGGGCT
GGGGGCCGTTGCCGTCGGCGCTGCTCGGCGTCGCCGCGGCGGCGTTGACGGGCACCCTTACCGGCGCGGTGACGGTGGGC
TGGCGGATTCCGTCGTTCATCGTCTCGCTCGGCGTGCTGGAAGCCGCGCGCGGCATGGCGTATCAGATGACGAATTCGCG
CACCGCCTACATCGGCGACGCGTTCGATTTTCTCTCGAACCCGATCGCCGTCGGCATCTCGCCGGCGTTCCTGATCGCGG
TGGCGGTGATGGTGATCGCGCAGTTGGTGTTGACGCGCACGGTGTTCGGCCGCTACCTGGTCGGCATCGGCACCAATGAG
GAAGCCGTGCGGCTGGCGGGCGTCAATCCGCGGCCGTACAAGGTGATCGTGTTTGCGCTGATGGGCGGCCTCGCCGGGCT
GGCCGCGCTGTTCCAGATCTCGCGTCTGGAAGCGGCCGATCCGAATGCGGGCGTCGGCCTGGAGCTGCAGGTGATCGCGG
CCGTGGTGATTGGCGGCACGAGCCTGATGGGCGGGCGCGGCTCGGTCATCAGCACTTTTTTTGGCGTGTTGATCATATCG
GTGCTGGCGGCCGGGCTCGCGCAGATCGGCGCGAACGAGCCGACCAAGCGGATGATCACCGGCGCGGTGATCGTGGTGGC
GGTGGTGCTGGATACGTATCGCAGCCGCCGCAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
TGCTGGCCGCGGCTTTCGCCGGCTATCGCAGCCGCGACGCGTTGCTGCACGCCGCCCCCGACATCAGCGAAGCAGGGAGT
CTGTCATGAACGATCAGTCG

Downstream 100 bases:

>100_bases
TTGGGGGCGGCACGCGCGGAACAGGCCGACAGCACGGGCCGGAGAATAACGCAGCAAGGGCAGTCACGGCGTCATGAGCG
GTAAAGCGTAAGAATTCATG

Product: ABC ribose transporter, inner membrane subunit

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPEASGDKPGAGRTDGAGGAGGAGGASGASGATPPADPSAPLASGKPAGTRLGFSNYLGLAGALLAMIVLFSLLSSHFLT
YDTFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALGGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVG
WRIPSFIVSLGVLEAARGMAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMVIAQLVLTRTVFGRYLVGIGTNE
EAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIIS
VLAAGLAQIGANEPTKRMITGAVIVVAVVLDTYRSRRKRA

Sequences:

>Translated_360_residues
MPEASGDKPGAGRTDGAGGAGGAGGASGASGATPPADPSAPLASGKPAGTRLGFSNYLGLAGALLAMIVLFSLLSSHFLT
YDTFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALGGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVG
WRIPSFIVSLGVLEAARGMAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMVIAQLVLTRTVFGRYLVGIGTNE
EAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIIS
VLAAGLAQIGANEPTKRMITGAVIVVAVVLDTYRSRRKRA
>Mature_359_residues
PEASGDKPGAGRTDGAGGAGGAGGASGASGATPPADPSAPLASGKPAGTRLGFSNYLGLAGALLAMIVLFSLLSSHFLTY
DTFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALGGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVGW
RIPSFIVSLGVLEAARGMAYQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMVIAQLVLTRTVFGRYLVGIGTNEE
AVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISV
LAAGLAQIGANEPTKRMITGAVIVVAVVLDTYRSRRKRA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=301, Percent_Identity=36.5448504983389, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1788896, Length=329, Percent_Identity=32.5227963525836, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1790524, Length=318, Percent_Identity=31.4465408805031, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI145693152, Length=324, Percent_Identity=30.8641975308642, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082395, Length=255, Percent_Identity=36.078431372549, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789992, Length=134, Percent_Identity=42.5373134328358, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI145693214, Length=251, Percent_Identity=33.0677290836653, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=26.8115942028986, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787794, Length=317, Percent_Identity=23.9747634069401, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36172; Mature: 36041

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEASGDKPGAGRTDGAGGAGGAGGASGASGATPPADPSAPLASGKPAGTRLGFSNYLGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVGWRIPSFIVSLGVLEAARGMA
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCE
YQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMVIAQLVLTRTVFGRYLVGIGTNE
EEECCCCEEEECHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
EAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGT
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
SLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRMITGAVIVVAVVLDTYRSRRKRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEASGDKPGAGRTDGAGGAGGAGGASGASGATPPADPSAPLASGKPAGTRLGFSNYLGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AGALLAMIVLFSLLSSHFLTYDTFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GGSVVSVAALKWGWGPLPSALLGVAAAALTGTLTGAVTVGWRIPSFIVSLGVLEAARGMA
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCE
YQMTNSRTAYIGDAFDFLSNPIAVGISPAFLIAVAVMVIAQLVLTRTVFGRYLVGIGTNE
EEECCCCEEEECHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
EAVRLAGVNPRPYKVIVFALMGGLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGT
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
SLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRMITGAVIVVAVVLDTYRSRRKRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]