| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is purR [H]
Identifier: 91783812
GI number: 91783812
Start: 2718467
End: 2719507
Strand: Reverse
Name: purR [H]
Synonym: Bxe_A2000
Alternate gene names: 91783812
Gene position: 2719507-2718467 (Counterclockwise)
Preceding gene: 91783813
Following gene: 91783811
Centisome position: 55.55
GC content: 65.9
Gene sequence:
>1041_bases ATGGCGACGATCAAGGATGTAGCGGCCGCGGCGGGCGTGTCGTTCACGACGGTATCCCACGTGGTGAACAACTCGCGGCC GGTGTCGGCCGACGTGCGCGCGAAGGTCGAACACGCGATCCGTCAGCTTCACTATGTTCCGTCGGCGGTGGCCCGCTCGC TGAAGGCGCGTTCGACGGCGACGATCGGGCTCGTCGTGCCGAACACCACGAACCCGTATTTCGCGGAACTGGCGCGCGGG ATCGAAGACGGTTGCTCACGCAACGGCTATTGCGTGTTCTTCTGCAATTCCGACGACGATCCGGCCAAGCAGCGCAACTA TCTTCGCGTGCTGCAGGAAAAGCGCATCGACGGCCTGATCGTCGCCTCCGCCGGCGACGACGCCGTGCTCGCGCAGACGC TCGCCGACTCGCGCGAGCCGCTGGTCATTCTGGATCGCAACATCGAAGGGCTGAACGCGGATCTGGTGCAGATCGACCAC GAGAAGGGCGCGTATTTCGCGACCCGGCACCTGCTCGAACTGGGGCACGTGCGGATCGGCTGCATAACGGGGCCGGTTCA GACGGCGGTCAGCGCAATGCGCGTGCACGGTTTTATCCGTGCGATGACCGAGCGCGGCATCGAGATTCCGCCCGATGCGA TCGTCGAAAGCGATTTTTCGGGCACCGGCGGCCACCGTGCGGCCGGCCAGTTGTTCGACACGGTCAAACCGTCGGCGATT TTTGCCTGCAACGACATGATGGGCATCGGCGCGCTGCGCGCAGCCGCCGAACGCAACATCAGCGTGCCGCGTGATTGCTC GATCATCGGTTTCGACGATATCGAACTGGGACGCTTCACTTATCCAGCGCTCTCGACCGTCGGGCAATCGGTGCGCGCGC TCGGCGACATGGCCGCGCAGACGCTGATCGAGCGGATCGCCGGCACCTCGTCCGGCAGTCCGCGTCCGCCGGGGCGCCGG CGCGTCGTTTCGCCGCGCCTGATCGTGCGCGAATCCACCGCGACCTGGGGCGGTGCGGCCAAACGCAATCTGGCGGCCTG A
Upstream 100 bases:
>100_bases GCGTAAGAATTCATGGGTTTGGTCAGTCTTCGAAGAAGACGTCCGGTGGGTCGCCAGGTGGCGTGGCCGGTGGGCAAAAC AGGCAGGAGAGCAACAGGTT
Downstream 100 bases:
>100_bases GGCGCCGCCGTGCGCGGACTTTCAGACGCGCATTCGCCCAGCGGCGGACCGCGGCTACTTGCGCTACGCATTCGTGCGTA ACCGCTGCTGATAACCGGAA
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MATIKDVAAAAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARSTATIGLVVPNTTNPYFAELARG IEDGCSRNGYCVFFCNSDDDPAKQRNYLRVLQEKRIDGLIVASAGDDAVLAQTLADSREPLVILDRNIEGLNADLVQIDH EKGAYFATRHLLELGHVRIGCITGPVQTAVSAMRVHGFIRAMTERGIEIPPDAIVESDFSGTGGHRAAGQLFDTVKPSAI FACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQSVRALGDMAAQTLIERIAGTSSGSPRPPGRR RVVSPRLIVRESTATWGGAAKRNLAA
Sequences:
>Translated_346_residues MATIKDVAAAAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARSTATIGLVVPNTTNPYFAELARG IEDGCSRNGYCVFFCNSDDDPAKQRNYLRVLQEKRIDGLIVASAGDDAVLAQTLADSREPLVILDRNIEGLNADLVQIDH EKGAYFATRHLLELGHVRIGCITGPVQTAVSAMRVHGFIRAMTERGIEIPPDAIVESDFSGTGGHRAAGQLFDTVKPSAI FACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQSVRALGDMAAQTLIERIAGTSSGSPRPPGRR RVVSPRLIVRESTATWGGAAKRNLAA >Mature_345_residues ATIKDVAAAAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARSTATIGLVVPNTTNPYFAELARGI EDGCSRNGYCVFFCNSDDDPAKQRNYLRVLQEKRIDGLIVASAGDDAVLAQTLADSREPLVILDRNIEGLNADLVQIDHE KGAYFATRHLLELGHVRIGCITGPVQTAVSAMRVHGFIRAMTERGIEIPPDAIVESDFSGTGGHRAAGQLFDTVKPSAIF ACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQSVRALGDMAAQTLIERIAGTSSGSPRPPGRRR VVSPRLIVRESTATWGGAAKRNLAA
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=341, Percent_Identity=39.5894428152493, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI1787948, Length=337, Percent_Identity=40.6528189910979, Blast_Score=240, Evalue=8e-65, Organism=Escherichia coli, GI1790369, Length=335, Percent_Identity=34.0298507462687, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1788474, Length=346, Percent_Identity=36.4161849710983, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1789202, Length=338, Percent_Identity=33.7278106508876, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789068, Length=341, Percent_Identity=30.4985337243402, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1786540, Length=314, Percent_Identity=30.8917197452229, Blast_Score=141, Evalue=8e-35, Organism=Escherichia coli, GI1787580, Length=323, Percent_Identity=29.7213622291022, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI48994940, Length=309, Percent_Identity=26.8608414239482, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790715, Length=316, Percent_Identity=25.6329113924051, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1787906, Length=345, Percent_Identity=26.0869565217391, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1786268, Length=331, Percent_Identity=27.7945619335347, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789456, Length=319, Percent_Identity=26.6457680250784, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790689, Length=312, Percent_Identity=24.3589743589744, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36974; Mature: 36842
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKDVAAAAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARSTA CCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TIGLVVPNTTNPYFAELARGIEDGCSRNGYCVFFCNSDDDPAKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE VASAGDDAVLAQTLADSREPLVILDRNIEGLNADLVQIDHEKGAYFATRHLLELGHVRIG EECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEE CITGPVQTAVSAMRVHGFIRAMTERGIEIPPDAIVESDFSGTGGHRAAGQLFDTVKPSAI EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCEE FACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQSVRALGDMAAQ EEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TLIERIAGTSSGSPRPPGRRRVVSPRLIVRESTATWGGAAKRNLAA HHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure ATIKDVAAAAGVSFTTVSHVVNNSRPVSADVRAKVEHAIRQLHYVPSAVARSLKARSTA CCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TIGLVVPNTTNPYFAELARGIEDGCSRNGYCVFFCNSDDDPAKQRNYLRVLQEKRIDGLI EEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE VASAGDDAVLAQTLADSREPLVILDRNIEGLNADLVQIDHEKGAYFATRHLLELGHVRIG EECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEE CITGPVQTAVSAMRVHGFIRAMTERGIEIPPDAIVESDFSGTGGHRAAGQLFDTVKPSAI EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCEE FACNDMMGIGALRAAAERNISVPRDCSIIGFDDIELGRFTYPALSTVGQSVRALGDMAAQ EEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TLIERIAGTSSGSPRPPGRRRVVSPRLIVRESTATWGGAAKRNLAA HHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA