| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaA [C]
Identifier: 91783802
GI number: 91783802
Start: 2706022
End: 2707104
Strand: Direct
Name: wcaA [C]
Synonym: Bxe_A2010
Alternate gene names: 91783802
Gene position: 2706022-2707104 (Clockwise)
Preceding gene: 91783801
Following gene: 91783803
Centisome position: 55.27
GC content: 64.36
Gene sequence:
>1083_bases ATGTCCATCACCTCGACTTCCTTCCAGCCACCCAAGGTATCCATCTGCCTGCCGACTTGCGACCGAGCGGAACTGATCGC GACATGCATCGACTCATGCCTCACGCAGAGCTACGGCAACCTGGAAATCGTGATCGGCGACGACTCGAAGGACACCCGCA CCGAGCAGTTGATCGCGGCGCGCTATGCGCATGAGCCGCGCGTGCGCTACAGGAAAAACCAGCCCGCGCTCGGCCAGGCG CGCAATGTCGCGAGCCTGTTCGAACGCGCGAGCGGCGACAAGATCCTGCTGATCCACGACGACGATCTGCTCGCCACGGA CGGCGTGGAGAAACTGGTGTCGTTATGGACGCGACATCCGCAACTGGATGCGGCGTTCGGCGACCAGTACGAGGCCGATC ACGGCGGCGCCATCGACTTCGAGGCAAGCGCGCGCCTGAACATGGCGTTTCGGCGCACGAAGGAAGCGGAAGGCCTGCAG GCTCTACCAGGCAGAACCGGCCTGGTCCAGATGTTCCCCAACAACGGCTGGATGGCCAACGCCGAACTCGTCAAACGGAT CGGCTACGAGGAAGCGTATGGCGTGTGCTGCGACTTCGTGTTCGGCACCCAGCTGTGTCTCGCGGCGCGCGAGGTGTTCT ATCTGCACGACTATGTGTCGGTGTATCGCAAGACCGCAAGCTCGATCTCGCATAGCACGCGCGGCACGACGCTCGCTGCG ACGCTCAGCGCGTATGCGTTCGTCAGGGCGCTGAAGTTGCCGGCAGAACTGGAGCCTTCGCGCAGGCTGGCGTTGCGCCG TCTGGCGCCGATCGTCGTGTCGGTCCACGCGAAGAATCGCCAGGCGCTGCCCGGCTTCAAGGTCGCCTTCACCCATCTGT TCGCGTACAGGTATGGGCTGAACATGCGGCTCTACTACCATCTTCTGATGCTCACGCGCAGCGCGTTGAGCGTGCACCGG CAGGCCGTGGCGGCGGCCGCGGTCGCGGCAGTGACCACTGCGCCCGCCGTTGCCGCGGATCCGGCCGGCGCCGTCAAGGA GTTCGTTTCGGAGTTCGTCAGCGATCGATCGGAGCCGGTGTGA
Upstream 100 bases:
>100_bases GATTATTTTTCCGATGTGATGGACTAGTTTTCTGCTTGCAGCGACCTGTGCGCCAAGCGAACCGGCTGCCGCCCCTCCAC AGATAAAAAAGGAGACGCTC
Downstream 100 bases:
>100_bases CGCAACGCCGGTGCGGTACTCGCCGCCGGTTAGTGCGGTGCGATAAGCGTGTTTTCTGCTAAGCATCCTCTGCTAAGCAA ACGCGTATTTGTTGCTTGGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSITSTSFQPPKVSICLPTCDRAELIATCIDSCLTQSYGNLEIVIGDDSKDTRTEQLIAARYAHEPRVRYRKNQPALGQA RNVASLFERASGDKILLIHDDDLLATDGVEKLVSLWTRHPQLDAAFGDQYEADHGGAIDFEASARLNMAFRRTKEAEGLQ ALPGRTGLVQMFPNNGWMANAELVKRIGYEEAYGVCCDFVFGTQLCLAAREVFYLHDYVSVYRKTASSISHSTRGTTLAA TLSAYAFVRALKLPAELEPSRRLALRRLAPIVVSVHAKNRQALPGFKVAFTHLFAYRYGLNMRLYYHLLMLTRSALSVHR QAVAAAAVAAVTTAPAVAADPAGAVKEFVSEFVSDRSEPV
Sequences:
>Translated_360_residues MSITSTSFQPPKVSICLPTCDRAELIATCIDSCLTQSYGNLEIVIGDDSKDTRTEQLIAARYAHEPRVRYRKNQPALGQA RNVASLFERASGDKILLIHDDDLLATDGVEKLVSLWTRHPQLDAAFGDQYEADHGGAIDFEASARLNMAFRRTKEAEGLQ ALPGRTGLVQMFPNNGWMANAELVKRIGYEEAYGVCCDFVFGTQLCLAAREVFYLHDYVSVYRKTASSISHSTRGTTLAA TLSAYAFVRALKLPAELEPSRRLALRRLAPIVVSVHAKNRQALPGFKVAFTHLFAYRYGLNMRLYYHLLMLTRSALSVHR QAVAAAAVAAVTTAPAVAADPAGAVKEFVSEFVSDRSEPV >Mature_359_residues SITSTSFQPPKVSICLPTCDRAELIATCIDSCLTQSYGNLEIVIGDDSKDTRTEQLIAARYAHEPRVRYRKNQPALGQAR NVASLFERASGDKILLIHDDDLLATDGVEKLVSLWTRHPQLDAAFGDQYEADHGGAIDFEASARLNMAFRRTKEAEGLQA LPGRTGLVQMFPNNGWMANAELVKRIGYEEAYGVCCDFVFGTQLCLAAREVFYLHDYVSVYRKTASSISHSTRGTTLAAT LSAYAFVRALKLPAELEPSRRLALRRLAPIVVSVHAKNRQALPGFKVAFTHLFAYRYGLNMRLYYHLLMLTRSALSVHRQ AVAAAAVAAVTTAPAVAADPAGAVKEFVSEFVSDRSEPV
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39591; Mature: 39459
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITSTSFQPPKVSICLPTCDRAELIATCIDSCLTQSYGNLEIVIGDDSKDTRTEQLIAA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH RYAHEPRVRYRKNQPALGQARNVASLFERASGDKILLIHDDDLLATDGVEKLVSLWTRHP HHCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHCCC QLDAAFGDQYEADHGGAIDFEASARLNMAFRRTKEAEGLQALPGRTGLVQMFPNNGWMAN CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEC AELVKRIGYEEAYGVCCDFVFGTQLCLAAREVFYLHDYVSVYRKTASSISHSTRGTTLAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TLSAYAFVRALKLPAELEPSRRLALRRLAPIVVSVHAKNRQALPGFKVAFTHLFAYRYGL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCC NMRLYYHLLMLTRSALSVHRQAVAAAAVAAVTTAPAVAADPAGAVKEFVSEFVSDRSEPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SITSTSFQPPKVSICLPTCDRAELIATCIDSCLTQSYGNLEIVIGDDSKDTRTEQLIAA CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH RYAHEPRVRYRKNQPALGQARNVASLFERASGDKILLIHDDDLLATDGVEKLVSLWTRHP HHCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHCCC QLDAAFGDQYEADHGGAIDFEASARLNMAFRRTKEAEGLQALPGRTGLVQMFPNNGWMAN CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEC AELVKRIGYEEAYGVCCDFVFGTQLCLAAREVFYLHDYVSVYRKTASSISHSTRGTTLAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TLSAYAFVRALKLPAELEPSRRLALRRLAPIVVSVHAKNRQALPGFKVAFTHLFAYRYGL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCC NMRLYYHLLMLTRSALSVHRQAVAAAAVAAVTTAPAVAADPAGAVKEFVSEFVSDRSEPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA