| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is trxB [C]
Identifier: 91783788
GI number: 91783788
Start: 2689124
End: 2690185
Strand: Reverse
Name: trxB [C]
Synonym: Bxe_A2024
Alternate gene names: 91783788
Gene position: 2690185-2689124 (Counterclockwise)
Preceding gene: 91783789
Following gene: 91783786
Centisome position: 54.95
GC content: 66.29
Gene sequence:
>1062_bases ATGAGTTCCGCCGCCAACCTGCCATCGCCATCGCCATCGCCGCCGATCCGCACCGACGTCCTGATCGTGGGCGCGGGCCC CGTGGGACTTTTTGCCGCCTTCGAGGCGGGCGTAATCGGCCTGTCCTGCCAGATCGTCGACGGGCTCGACAAGGTCGGCG GCCAATGCATCGAGCTGTATCCGGACAAGCCGATCTACGATATTCCCGCCATTCCATCCTGCACGGCGCGGGAGCTGGTC GAGCGCCTGCTCGCGCAATGCAGGCCGTTCGACCCGCCCATTCATCTCGAACAGCGGGTCGAGTCGGTCGAGCAGGGTGG CGACGGGCGCTGGACCGTGCGTACCGATCGCGGCCTCGTGTTCGATGTCGCGGCGATCCTGCTGGCCGCCGGCAACGGCG CGTTCGTGCCGCAAAAGCTGGCGCTGGCTGAAGCCGTGCCGCTGGAGTCGCGTCACGTGCATTACAGCGTGCCGCGTCTT GCCGACTTCGCCGGCAAGACCGTGGTCGTGGCCGGCGGCGGTGACTCCGCGCTCGACTGGGCATTGGCGCTGCGCAAGGT CGCGCGCCGGGTGACGCTGGTGCATCGGCGCAGCGGTTTCAGTGCGGCGGATTCGAGTGTCGAGTCGATGCGGCGCGCGG TCGAGGCGGGCGAGATGGACTTCGTGGTCGGCGCGATTGCGGGCCTCGACGTCGAGGACGATGCGTTGAAGTCGATTACC TTGCGGCATATCGAGGGCGAGACGCAACTCGCCGCCGAGCATCTCGTCGCGCTGTACGGACTCGTCGCCGATCTCGGGCC GATCGCGCAATGGGGACTGTCGATTCACGGCGGCCGTGTCGATGTGGATACGTCGAACTACGAGAGCTCGCGGCCCGGCA TTTTCGCGGTCGGCGACATTGCCCACTATCCGAACAAGCAGAAGCTGATCCTGTCGGGCTTTCACGAGGCGTCGCTGGCG CTGCGCAAGGCGTACTCGTACGCTTATCCGGAGAAGAAGCGCGTGCACGTCCATTCGAGTTACGACGCGAAGCTGGCGGA AAAGGTCAGTGCTGCCGGCTGA
Upstream 100 bases:
>100_bases ATCGGCCACGCCGAGCGCCCTTACCGATGGTAATGGCATCGTTGCCGTGCATTCGGCGATTCGGTATGGTGGGTCATCCA CCTATCCGAAGAGATCGCGC
Downstream 100 bases:
>100_bases CTGTCCGGTGGCAACGAGGGCTCCGTTTTTGCCGCTGATTTCGCGGCCGACTTCGCCGCTGACTTCGTACTGACTGTCCC GCGTCAACAAAGACCTCATT
Product: putative thioredoxin reductase, trxB
Products: NA
Alternate protein names: FNR; Fd-NADP+ reductase
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELV ERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRL ADFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLA LRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG
Sequences:
>Translated_353_residues MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELV ERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRL ADFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLA LRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG >Mature_352_residues SSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELVE RLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLA DFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSITL RHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLAL RKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 2 family
Homologues:
Organism=Escherichia coli, GI1787114, Length=315, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): FENR_BURXL (Q13Y97)
Other databases:
- EMBL: CP000270 - RefSeq: YP_558994.1 - ProteinModelPortal: Q13Y97 - SMR: Q13Y97 - GeneID: 4003339 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A2024 - HOGENOM: HBG669726 - OMA: YPNKQKL - ProtClustDB: CLSK896839 - HAMAP: MF_01685 - InterPro: IPR013027 - InterPro: IPR022890 - InterPro: IPR001327 - InterPro: IPR000103 - PRINTS: PR00368 - PRINTS: PR00469
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2
EC number: =1.18.1.2
Molecular weight: Translated: 37587; Mature: 37456
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: BINDING 47-47 BINDING 55-55 BINDING 60-60 BINDING 100-100 BINDING 135-135 BINDING 299-299 BINDING 340-340
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELY CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEHHHHHCCCEEEEEC PDKPIYDIPAIPSCTARELVERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHH FDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLADFAGKTVVVAGGGDSALDW HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEECCCCHHHHH ALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHH LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDI HHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCCCCEEEECCH AHYPNKQKLILSGFHEASLALRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG HHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure SSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELY CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEHHHHHCCCEEEEEC PDKPIYDIPAIPSCTARELVERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLV CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHH FDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLADFAGKTVVVAGGGDSALDW HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEECCCCHHHHH ALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHH LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDI HHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCCCCEEEECCH AHYPNKQKLILSGFHEASLALRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG HHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA