Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is trxB [C]

Identifier: 91783788

GI number: 91783788

Start: 2689124

End: 2690185

Strand: Reverse

Name: trxB [C]

Synonym: Bxe_A2024

Alternate gene names: 91783788

Gene position: 2690185-2689124 (Counterclockwise)

Preceding gene: 91783789

Following gene: 91783786

Centisome position: 54.95

GC content: 66.29

Gene sequence:

>1062_bases
ATGAGTTCCGCCGCCAACCTGCCATCGCCATCGCCATCGCCGCCGATCCGCACCGACGTCCTGATCGTGGGCGCGGGCCC
CGTGGGACTTTTTGCCGCCTTCGAGGCGGGCGTAATCGGCCTGTCCTGCCAGATCGTCGACGGGCTCGACAAGGTCGGCG
GCCAATGCATCGAGCTGTATCCGGACAAGCCGATCTACGATATTCCCGCCATTCCATCCTGCACGGCGCGGGAGCTGGTC
GAGCGCCTGCTCGCGCAATGCAGGCCGTTCGACCCGCCCATTCATCTCGAACAGCGGGTCGAGTCGGTCGAGCAGGGTGG
CGACGGGCGCTGGACCGTGCGTACCGATCGCGGCCTCGTGTTCGATGTCGCGGCGATCCTGCTGGCCGCCGGCAACGGCG
CGTTCGTGCCGCAAAAGCTGGCGCTGGCTGAAGCCGTGCCGCTGGAGTCGCGTCACGTGCATTACAGCGTGCCGCGTCTT
GCCGACTTCGCCGGCAAGACCGTGGTCGTGGCCGGCGGCGGTGACTCCGCGCTCGACTGGGCATTGGCGCTGCGCAAGGT
CGCGCGCCGGGTGACGCTGGTGCATCGGCGCAGCGGTTTCAGTGCGGCGGATTCGAGTGTCGAGTCGATGCGGCGCGCGG
TCGAGGCGGGCGAGATGGACTTCGTGGTCGGCGCGATTGCGGGCCTCGACGTCGAGGACGATGCGTTGAAGTCGATTACC
TTGCGGCATATCGAGGGCGAGACGCAACTCGCCGCCGAGCATCTCGTCGCGCTGTACGGACTCGTCGCCGATCTCGGGCC
GATCGCGCAATGGGGACTGTCGATTCACGGCGGCCGTGTCGATGTGGATACGTCGAACTACGAGAGCTCGCGGCCCGGCA
TTTTCGCGGTCGGCGACATTGCCCACTATCCGAACAAGCAGAAGCTGATCCTGTCGGGCTTTCACGAGGCGTCGCTGGCG
CTGCGCAAGGCGTACTCGTACGCTTATCCGGAGAAGAAGCGCGTGCACGTCCATTCGAGTTACGACGCGAAGCTGGCGGA
AAAGGTCAGTGCTGCCGGCTGA

Upstream 100 bases:

>100_bases
ATCGGCCACGCCGAGCGCCCTTACCGATGGTAATGGCATCGTTGCCGTGCATTCGGCGATTCGGTATGGTGGGTCATCCA
CCTATCCGAAGAGATCGCGC

Downstream 100 bases:

>100_bases
CTGTCCGGTGGCAACGAGGGCTCCGTTTTTGCCGCTGATTTCGCGGCCGACTTCGCCGCTGACTTCGTACTGACTGTCCC
GCGTCAACAAAGACCTCATT

Product: putative thioredoxin reductase, trxB

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELV
ERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRL
ADFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT
LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLA
LRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG

Sequences:

>Translated_353_residues
MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELV
ERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRL
ADFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT
LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLA
LRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG
>Mature_352_residues
SSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELYPDKPIYDIPAIPSCTARELVE
RLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLVFDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLA
DFAGKTVVVAGGGDSALDWALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSITL
RHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDIAHYPNKQKLILSGFHEASLAL
RKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Escherichia coli, GI1787114, Length=315, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR_BURXL (Q13Y97)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_558994.1
- ProteinModelPortal:   Q13Y97
- SMR:   Q13Y97
- GeneID:   4003339
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A2024
- HOGENOM:   HBG669726
- OMA:   YPNKQKL
- ProtClustDB:   CLSK896839
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 37587; Mature: 37456

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: BINDING 47-47 BINDING 55-55 BINDING 60-60 BINDING 100-100 BINDING 135-135 BINDING 299-299 BINDING 340-340

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELY
CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEHHHHHCCCEEEEEC
PDKPIYDIPAIPSCTARELVERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLV
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHH
FDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLADFAGKTVVVAGGGDSALDW
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEECCCCHHHHH
ALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHH
LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDI
HHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCCCCEEEECCH
AHYPNKQKLILSGFHEASLALRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG
HHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure 
SSAANLPSPSPSPPIRTDVLIVGAGPVGLFAAFEAGVIGLSCQIVDGLDKVGGQCIELY
CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEHHHHHCCCEEEEEC
PDKPIYDIPAIPSCTARELVERLLAQCRPFDPPIHLEQRVESVEQGGDGRWTVRTDRGLV
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHH
FDVAAILLAAGNGAFVPQKLALAEAVPLESRHVHYSVPRLADFAGKTVVVAGGGDSALDW
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHCCCEEEEECCCCHHHHH
ALALRKVARRVTLVHRRSGFSAADSSVESMRRAVEAGEMDFVVGAIAGLDVEDDALKSIT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHH
LRHIEGETQLAAEHLVALYGLVADLGPIAQWGLSIHGGRVDVDTSNYESSRPGIFAVGDI
HHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCCCCCCCCCCEEEECCH
AHYPNKQKLILSGFHEASLALRKAYSYAYPEKKRVHVHSSYDAKLAEKVSAAG
HHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA