| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ycaP [C]
Identifier: 91783782
GI number: 91783782
Start: 2683312
End: 2683806
Strand: Reverse
Name: ycaP [C]
Synonym: Bxe_A2030
Alternate gene names: 91783782
Gene position: 2683806-2683312 (Counterclockwise)
Preceding gene: 91783783
Following gene: 91783779
Centisome position: 54.82
GC content: 65.05
Gene sequence:
>495_bases ATGATGGACACAATCTCCTTGCTGTTCGGTCAGGGCAGGACGCTCGACCCGCTCCAGATGGGCCTACGCTCGATCGTCGT GTTCCTTGTCGCGCTGGTGCTGATCCGCATTTCGGGCCGGCGCTCCTTCGGGCAGCGCTCGCCATTCGATTCGGTGGTGG TGATCCTGCTCGGCGCGACGCTGAGCCGGGCCATTGTCGGTGCGTCGCCGTTTGTCGCGACGGTGGTGGCGTCGTTCGTG ATCGTCGCGTGCCATCGGTTGCTGGCGTGGGCATGCATGCGCTCGCCCGCGCTGGAGCGGCTGGTGGGCGGCGTCGAGCG CGAGGTGTTCAGCAACGGCGCGTTCAATGCGCGCGAAATGGACGCGGCCCTCATCACACCGACCGATGTGCAGGAAAGCG TGCGCCAGAAAACCGGCTCACGTTCGATGGATCACGTCGCCGCGGCCATTCTCGAACGCAATGGCGAAGTGAGCGTGATC CGCAAGAAGCGCTGA
Upstream 100 bases:
>100_bases CGGGCGGAGGAAAGCGCATGAAAGCGTGAGCGCGCCGCGCCGCAAAAACCGTTTCGGCCGCGCACCATCAAAGACGGCTG CACGCCGCGAGGAGGGCGGC
Downstream 100 bases:
>100_bases AGCCGGCCGACAGTGACGGCGACGGCAGCGACCGGTGCGCCCGCTCAGCCGCGGCCGCCGCGCGAGATTTCCTCGCCCGC GCGATGCGGCATGCGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI RKKR
Sequences:
>Translated_164_residues MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI RKKR >Mature_164_residues MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGATLSRAIVGASPFVATVVASFV IVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREMDAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVI RKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17796; Mature: 17796
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGAT CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LSRAIVGASPFVATVVASFVIVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHC DAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVIRKKR CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MMDTISLLFGQGRTLDPLQMGLRSIVVFLVALVLIRISGRRSFGQRSPFDSVVVILLGAT CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LSRAIVGASPFVATVVASFVIVACHRLLAWACMRSPALERLVGGVEREVFSNGAFNAREM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHC DAALITPTDVQESVRQKTGSRSMDHVAAAILERNGEVSVIRKKR CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA