Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is bsdB [H]

Identifier: 91783742

GI number: 91783742

Start: 2641516

End: 2642172

Strand: Reverse

Name: bsdB [H]

Synonym: Bxe_A2072

Alternate gene names: 91783742

Gene position: 2642172-2641516 (Counterclockwise)

Preceding gene: 91783743

Following gene: 91783741

Centisome position: 53.97

GC content: 67.43

Gene sequence:

>657_bases
ATGGCTGAGCAGGAACATGAGCACGAACATGAGCACAAGCGTGGGCAGACGCGCGAGCGCATCGTGGTGGGCCTTTCCGG
CGCGAGCGGCGCGATGATCGGCGTGCGTCTGCTCGCCGCGTTGCGGCGCCTCGGCACGCACGAAACGCATCTGATCGTAT
CGGCCTCCGGCGCGCTCACGGCGGCCCAGGAACTCGGCATCACGCGCGGCGACCTGGAGCGCGTGGCCGATGTGGTCTAC
AACGTGCGCGACATCGGCGCGGCCGTGGCGAGCGGTTCGTTCATCACGGCGGGCATGGTGATCGCGCCGTGCTCGATGAA
GACGCTCGCCGGCGTGGCCAACGGTTTCGCCGACAACCTGCTCACGCGCGCCGCCGACGTGATGCTCAAGGAGCGCCGCC
GGCTCGTGCTGGTCGCGCGCGAAACGCCGCTCAACCTCGCGCATCTGCGCAATATGACGCTCGCCACCGAAATGGGCGCG
ATCGTCATGCCGCCGGTGCCCGCGTTCTACGTGCACCCCAGGACCATCGAGGACGTGGTCGATCACACCGTGGGGCGCAT
TCTCGATCTGTTCGGTATCGAGCATCGCGAGATCGCGCAACGCTGGAGCGGACTCGCCGATGAATTCGGTGAGCGCCGTG
CGGGAGTCGACCAATGA

Upstream 100 bases:

>100_bases
GTGTTCACGCGCGTGCGGATTCCGGGGCAGGACACGGTGGACCTGGACGCGCTCGTCGCTGCGGACAACACCGCGTTCGA
CGCGTATCTGGATGGCGCTC

Downstream 100 bases:

>100_bases
ATCAACGCGACATGCTCCATGCAGGCGACGCCGCGACGCAGGAACGCGACACGGAGTTGGAAAAACGCCCGCAGCGGCAT
CTTGGCCGCCCGATGCAACG

Product: putative aromatic acid decarboxylase, flavoprotein

Products: NA

Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit B; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit B; Vanillate decarboxylase subunit B [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAEQEHEHEHEHKRGQTRERIVVGLSGASGAMIGVRLLAALRRLGTHETHLIVSASGALTAAQELGITRGDLERVADVVY
NVRDIGAAVASGSFITAGMVIAPCSMKTLAGVANGFADNLLTRAADVMLKERRRLVLVARETPLNLAHLRNMTLATEMGA
IVMPPVPAFYVHPRTIEDVVDHTVGRILDLFGIEHREIAQRWSGLADEFGERRAGVDQ

Sequences:

>Translated_218_residues
MAEQEHEHEHEHKRGQTRERIVVGLSGASGAMIGVRLLAALRRLGTHETHLIVSASGALTAAQELGITRGDLERVADVVY
NVRDIGAAVASGSFITAGMVIAPCSMKTLAGVANGFADNLLTRAADVMLKERRRLVLVARETPLNLAHLRNMTLATEMGA
IVMPPVPAFYVHPRTIEDVVDHTVGRILDLFGIEHREIAQRWSGLADEFGERRAGVDQ
>Mature_217_residues
AEQEHEHEHEHKRGQTRERIVVGLSGASGAMIGVRLLAALRRLGTHETHLIVSASGALTAAQELGITRGDLERVADVVYN
VRDIGAAVASGSFITAGMVIAPCSMKTLAGVANGFADNLLTRAADVMLKERRRLVLVARETPLNLAHLRNMTLATEMGAI
VMPPVPAFYVHPRTIEDVVDHTVGRILDLFGIEHREIAQRWSGLADEFGERRAGVDQ

Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=187, Percent_Identity=53.475935828877, Blast_Score=204, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6320746, Length=207, Percent_Identity=45.4106280193237, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 23667; Mature: 23535

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQEHEHEHEHKRGQTRERIVVGLSGASGAMIGVRLLAALRRLGTHETHLIVSASGALT
CCCCHHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
AAQELGITRGDLERVADVVYNVRDIGAAVASGSFITAGMVIAPCSMKTLAGVANGFADNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LTRAADVMLKERRRLVLVARETPLNLAHLRNMTLATEMGAIVMPPVPAFYVHPRTIEDVV
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHH
DHTVGRILDLFGIEHREIAQRWSGLADEFGERRAGVDQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEQEHEHEHEHKRGQTRERIVVGLSGASGAMIGVRLLAALRRLGTHETHLIVSASGALT
CCCHHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
AAQELGITRGDLERVADVVYNVRDIGAAVASGSFITAGMVIAPCSMKTLAGVANGFADNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LTRAADVMLKERRRLVLVARETPLNLAHLRNMTLATEMGAIVMPPVPAFYVHPRTIEDVV
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHH
DHTVGRILDLFGIEHREIAQRWSGLADEFGERRAGVDQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]