| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cutS [H]
Identifier: 91783739
GI number: 91783739
Start: 2637109
End: 2637639
Strand: Reverse
Name: cutS [H]
Synonym: Bxe_A2075
Alternate gene names: 91783739
Gene position: 2637639-2637109 (Counterclockwise)
Preceding gene: 91783740
Following gene: 91783738
Centisome position: 53.88
GC content: 69.68
Gene sequence:
>531_bases GTGCACGTCATGCGGCAGGGCGAGCAGCAGCGCGTCACGCTGACGCTCAATGGCCGTGAATGCAGCGGCTATTGCGAGCC GCGCGAACTGCTGTCGGATTTCATCCGTCACGAGCTGGGCGCGACCGGCACCCACGTCGGCTGCGAGCACGGCGTGTGCG GCGCGTGCACGGTGCACGTGGACGGCGTGGCGGGACGCTCGTGCCTGATGCTCGCGGTGCAGGCGCAGGGACGCCGCATC GACACCGTGGAGGGACTCGCGCCCGACATGCAGCTGGGCGATCTGCAGCAGGCGTTCCAGCGTCATCATGCGCTGCAGTG CGGGTTCTGCACGGCCGGCATCCTGATGTCGTGCGCGGACTATCTGCGGCGCGTGCCGGATCCGAGCGAAGCGCAGGTGC GCGACATGCTCTCCGGCCATCTGTGCCGCTGTACGGGCTATACGCCGATCGTCGCCGCGGTGCTCGACGTGGCGGCGCGG CGCAGACAAGGCAACGCGGCCGGCGAGACCGTGGAGGCCGCTCATGCTTGA
Upstream 100 bases:
>100_bases ACGCGCATATCAGCGCGACCTATCGCCGGCATCTGGTCCGGCAACTCGGATGGCGCGTGATCGAGGAGGCGAAGTGAGCA ACACATCGAACGGCAACGTC
Downstream 100 bases:
>100_bases CCTCGGCCGAACCTTTCTGCAAAGCGTGGAACGCAGCCCCAATGCGCTGGCGCTGGTGGACGGCGAACTGGCGCTGACTT ACGCGCAGTGGCACCGGCTC
Product: oxidoreductase, iron-sulfur subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MHVMRQGEQQRVTLTLNGRECSGYCEPRELLSDFIRHELGATGTHVGCEHGVCGACTVHVDGVAGRSCLMLAVQAQGRRI DTVEGLAPDMQLGDLQQAFQRHHALQCGFCTAGILMSCADYLRRVPDPSEAQVRDMLSGHLCRCTGYTPIVAAVLDVAAR RRQGNAAGETVEAAHA
Sequences:
>Translated_176_residues MHVMRQGEQQRVTLTLNGRECSGYCEPRELLSDFIRHELGATGTHVGCEHGVCGACTVHVDGVAGRSCLMLAVQAQGRRI DTVEGLAPDMQLGDLQQAFQRHHALQCGFCTAGILMSCADYLRRVPDPSEAQVRDMLSGHLCRCTGYTPIVAAVLDVAAR RRQGNAAGETVEAAHA >Mature_176_residues MHVMRQGEQQRVTLTLNGRECSGYCEPRELLSDFIRHELGATGTHVGCEHGVCGACTVHVDGVAGRSCLMLAVQAQGRRI DTVEGLAPDMQLGDLQQAFQRHHALQCGFCTAGILMSCADYLRRVPDPSEAQVRDMLSGHLCRCTGYTPIVAAVLDVAAR RRQGNAAGETVEAAHA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=153, Percent_Identity=33.9869281045752, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI71773480, Length=88, Percent_Identity=40.9090909090909, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1786480, Length=170, Percent_Identity=36.4705882352941, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1789232, Length=155, Percent_Identity=41.9354838709677, Blast_Score=108, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17540638, Length=143, Percent_Identity=36.3636363636364, Blast_Score=104, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17539860, Length=139, Percent_Identity=37.410071942446, Blast_Score=103, Evalue=4e-23, Organism=Caenorhabditis elegans, GI32566215, Length=160, Percent_Identity=33.75, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=35.5263157894737, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647193, Length=162, Percent_Identity=31.4814814814815, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647199, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI24647195, Length=144, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24647201, Length=158, Percent_Identity=32.2784810126582, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24647197, Length=144, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 18972; Mature: 18972
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVMRQGEQQRVTLTLNGRECSGYCEPRELLSDFIRHELGATGTHVGCEHGVCGACTVHV CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE DGVAGRSCLMLAVQAQGRRIDTVEGLAPDMQLGDLQQAFQRHHALQCGFCTAGILMSCAD CCCCCCHHEEEEECCCCCEECHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLRRVPDPSEAQVRDMLSGHLCRCTGYTPIVAAVLDVAARRRQGNAAGETVEAAHA HHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MHVMRQGEQQRVTLTLNGRECSGYCEPRELLSDFIRHELGATGTHVGCEHGVCGACTVHV CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE DGVAGRSCLMLAVQAQGRRIDTVEGLAPDMQLGDLQQAFQRHHALQCGFCTAGILMSCAD CCCCCCHHEEEEECCCCCEECHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLRRVPDPSEAQVRDMLSGHLCRCTGYTPIVAAVLDVAARRRQGNAAGETVEAAHA HHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]