Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yobA [C]

Identifier: 91783730

GI number: 91783730

Start: 2627759

End: 2628160

Strand: Reverse

Name: yobA [C]

Synonym: Bxe_A2084

Alternate gene names: 91783730

Gene position: 2628160-2627759 (Counterclockwise)

Preceding gene: 91783731

Following gene: 91783728

Centisome position: 53.68

GC content: 66.92

Gene sequence:

>402_bases
ATGAAGATGAATGACACGATCAGGAACCTTTGCCGCGGCGGCATGCGCGCAGCCGCGAAACTGCTGGCGGCGTCGCTCGC
CGTTTTCGCAATGGCGAGCATGGCCTTCGCACATGTGTTCCCGCAGAAGCAGGAGCCGGGAGCGGGCGCGACGGTGGCCT
CGCCCGCACAGGTGCGGGTGATTTTCGACGGGCCGCTGGAGGCGGCGTTCAGTTCGCTGACGGTGACCGACGCGAGCGGC
AAGCAGGTCAACGCGCAGAAAGCCGCGGTCGACGAGCATCAACCGGCGCTGATCGCCGTGCCGTTGCCGCCGCTCGCGGC
GGGCCGCTATACGGTGCATTGGGTGGCCGTGGCGTCGGATGGACATCGCACCCACGGCGACTACGCGTTCAACGTGAAGT
AG

Upstream 100 bases:

>100_bases
TCGCACGTGGGCATTCTGGTTCAGGCGCATATCTTCTTCGACGATGTCGCGCCGGCCACGATCGGCAAACCTCTATTCCA
GTAAGAGCAGGAGAGTCACG

Downstream 100 bases:

>100_bases
CCGGAAACGGTGATGCGCTGCGCCATCCATCGGGCCCGCTCGGGCTTCATCGGGCAAGGGCGCAGCGCGTGAAAAGGTCT
ACTACCGGAAAGACGCATCG

Product: putative cation resistance protein, CopC-like

Products: NA

Alternate protein names: Copper Resistance Protein; Cation Resistance Protein CopC-Like; Copper-Resistance Exported Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG
KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK

Sequences:

>Translated_133_residues
MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG
KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK
>Mature_133_residues
MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG
KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13940; Mature: 13940

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEE
IFDGPLEAAFSSLTVTDASGKQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASD
EECCCHHHHHHEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECC
GHRTHGDYAFNVK
CCCCCCCEEEECC
>Mature Secondary Structure
MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEE
IFDGPLEAAFSSLTVTDASGKQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASD
EECCCHHHHHHEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECC
GHRTHGDYAFNVK
CCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA