| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yobA [C]
Identifier: 91783730
GI number: 91783730
Start: 2627759
End: 2628160
Strand: Reverse
Name: yobA [C]
Synonym: Bxe_A2084
Alternate gene names: 91783730
Gene position: 2628160-2627759 (Counterclockwise)
Preceding gene: 91783731
Following gene: 91783728
Centisome position: 53.68
GC content: 66.92
Gene sequence:
>402_bases ATGAAGATGAATGACACGATCAGGAACCTTTGCCGCGGCGGCATGCGCGCAGCCGCGAAACTGCTGGCGGCGTCGCTCGC CGTTTTCGCAATGGCGAGCATGGCCTTCGCACATGTGTTCCCGCAGAAGCAGGAGCCGGGAGCGGGCGCGACGGTGGCCT CGCCCGCACAGGTGCGGGTGATTTTCGACGGGCCGCTGGAGGCGGCGTTCAGTTCGCTGACGGTGACCGACGCGAGCGGC AAGCAGGTCAACGCGCAGAAAGCCGCGGTCGACGAGCATCAACCGGCGCTGATCGCCGTGCCGTTGCCGCCGCTCGCGGC GGGCCGCTATACGGTGCATTGGGTGGCCGTGGCGTCGGATGGACATCGCACCCACGGCGACTACGCGTTCAACGTGAAGT AG
Upstream 100 bases:
>100_bases TCGCACGTGGGCATTCTGGTTCAGGCGCATATCTTCTTCGACGATGTCGCGCCGGCCACGATCGGCAAACCTCTATTCCA GTAAGAGCAGGAGAGTCACG
Downstream 100 bases:
>100_bases CCGGAAACGGTGATGCGCTGCGCCATCCATCGGGCCCGCTCGGGCTTCATCGGGCAAGGGCGCAGCGCGTGAAAAGGTCT ACTACCGGAAAGACGCATCG
Product: putative cation resistance protein, CopC-like
Products: NA
Alternate protein names: Copper Resistance Protein; Cation Resistance Protein CopC-Like; Copper-Resistance Exported Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK
Sequences:
>Translated_133_residues MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK >Mature_133_residues MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRVIFDGPLEAAFSSLTVTDASG KQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASDGHRTHGDYAFNVK
Specific function: Unknown
COG id: COG2372
COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13940; Mature: 13940
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEE IFDGPLEAAFSSLTVTDASGKQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASD EECCCHHHHHHEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECC GHRTHGDYAFNVK CCCCCCCEEEECC >Mature Secondary Structure MKMNDTIRNLCRGGMRAAAKLLAASLAVFAMASMAFAHVFPQKQEPGAGATVASPAQVRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEE IFDGPLEAAFSSLTVTDASGKQVNAQKAAVDEHQPALIAVPLPPLAAGRYTVHWVAVASD EECCCHHHHHHEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECC GHRTHGDYAFNVK CCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA