| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is atzC [H]
Identifier: 91783694
GI number: 91783694
Start: 2585786
End: 2587003
Strand: Direct
Name: atzC [H]
Synonym: Bxe_A2120
Alternate gene names: 91783694
Gene position: 2585786-2587003 (Clockwise)
Preceding gene: 91783692
Following gene: 91783696
Centisome position: 52.82
GC content: 69.05
Gene sequence:
>1218_bases ATGCCCACGACCGCTTCCGACCTCCCGACAACCGGCCTGCTGATCACCGACGTCCGTCTGGCGAACGGCGCGCGCGTCGA CGTGTCGATCGCCGCCGGCCGCATCGCCGCGCTCGGTCCCGACCTGCCGCGCGAGCCGAACCTGACCGTCGAGGACGGCG CCGGCGCGTTGCTGCTGCCGGGTTTTGTCGAAGGACATACGCACCTGGATAAAACCAGTTGGGGCTTGCCGTGGTATCGC AACGAGGTCGGCCCGAAGCTCACCGACCGCATCGAAAACGAACGGCGCTGGCGAGCGCAAAGCGGACATGACGCGGGTCA GCAATCGCTCGCGCTCGCCCGCGCGTTCATGCAGGCGGGCACGACGCGCCTGCGCACGCACGTCGATATCGACACCGCTG CCGGGTTGCGTCATCTGGAAGGCGTGCTTGCCACGCGCGAAACGCTCGGCGACGTGCTCGACATGCAGATCGTCGCGTTT CCGCAATCGGGCGTGCTTGGCCGACCCGGCACCGAAGCGCTGCTCGGCGACGCCCTGAAGGCAGGCGCCGACGTGCTCGG CGCGCTCGATCCCGCGTTGATCGACGGCGACCCGGTGGCGTCGCTCGATCTGACTTTCGATCTCGCGCAGCGGCATGCGA AGCCGATCGACATCCATCTGCACGAGCCGGGCGAAATCGGCGCGTTCACGCTCGGTCTGCTGCTCGACCGGGTTGCGGCG CTCGGCATGCAAGGGCAAGTGGTGGTGAGCCATGCGTTCTGTCTCGGCGCGTTGCCCGAGCGCGAACGCGACGCCCTGCT CGAACGGCTGGCCGCTCTGCGCGTTGCGTTGCTCACCACCGCTCCGCCATCGACAACCGTTCCGCCGCTCAAGGCCTGCC TCGAAAAAGGCGTGACCTTGTTCGGCGGCAACGACGGCGTGCGCGACACGTGGACACCCTACGGCTCGCCCGACATGCTC GAACGCGCGATGCTGATCGCAATGCGCTACGGCCTGCGCCGCGACGACGACCTCGCCATCGCATTCGACTGCGTGAGCAC CGCCGCCGCGCAGGCCTGCGGATTCGCCGACTATGGCTTGCACGCGGGCGCGCGCGCCGACCTCGTGCTGGTGGACGCGG ACACGGTCGCGCATGCGCTCGTCGCCCGGCCGCCGAGAAAGCTCGTGGTGTCGCACGGCCGGATCGTCGCGCGTAGCGGC ACGCACGCAAGCCACTGA
Upstream 100 bases:
>100_bases TCCGCCGGGTCGGCAACACGTCTATTGGTCAGACAATTGAACGCGTCTTCGACCGTGCACCACCGGCCTCTGTCTCTCGC ATAACAACCGCCCTGCTTTC
Downstream 100 bases:
>100_bases AAAACGCGTGGCAGAGGCCGGCCGTATTCCGATTCACACGGCGGCGTACACACCGGCCATCCGCGGCTCTCGAAACGGCG CGCGTCCTGCATCACATCAC
Product: cytosine deaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYR NEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAF PQSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDML ERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSG THASH
Sequences:
>Translated_405_residues MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYR NEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAF PQSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDML ERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSG THASH >Mature_404_residues PTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYRN EVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFP QSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAAL GMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDMLE RAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGT HASH
Specific function: Transforms N-isopropylammelide to cyanuric acid and isopropylamine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
Organism=Escherichia coli, GI1786517, Length=381, Percent_Identity=32.5459317585302, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1786531, Length=402, Percent_Identity=29.6019900497512, Blast_Score=131, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: =3.5.99.4 [H]
Molecular weight: Translated: 42859; Mature: 42728
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLP CCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEC GFVEGHTHLDKTSWGLPWYRNEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAG CHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC TTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFPQSGVLGRPGTEALLGDALK CHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH AGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA HHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTL CCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEE FGGNDGVRDTWTPYGSPDMLERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHCC HAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGTHASH CCCCCCCEEEEECHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure PTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLP CCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEC GFVEGHTHLDKTSWGLPWYRNEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAG CHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC TTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFPQSGVLGRPGTEALLGDALK CHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH AGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA HHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTL CCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEE FGGNDGVRDTWTPYGSPDMLERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGL ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHCC HAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGTHASH CCCCCCCEEEEECHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9422605 [H]