Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is atzC [H]

Identifier: 91783694

GI number: 91783694

Start: 2585786

End: 2587003

Strand: Direct

Name: atzC [H]

Synonym: Bxe_A2120

Alternate gene names: 91783694

Gene position: 2585786-2587003 (Clockwise)

Preceding gene: 91783692

Following gene: 91783696

Centisome position: 52.82

GC content: 69.05

Gene sequence:

>1218_bases
ATGCCCACGACCGCTTCCGACCTCCCGACAACCGGCCTGCTGATCACCGACGTCCGTCTGGCGAACGGCGCGCGCGTCGA
CGTGTCGATCGCCGCCGGCCGCATCGCCGCGCTCGGTCCCGACCTGCCGCGCGAGCCGAACCTGACCGTCGAGGACGGCG
CCGGCGCGTTGCTGCTGCCGGGTTTTGTCGAAGGACATACGCACCTGGATAAAACCAGTTGGGGCTTGCCGTGGTATCGC
AACGAGGTCGGCCCGAAGCTCACCGACCGCATCGAAAACGAACGGCGCTGGCGAGCGCAAAGCGGACATGACGCGGGTCA
GCAATCGCTCGCGCTCGCCCGCGCGTTCATGCAGGCGGGCACGACGCGCCTGCGCACGCACGTCGATATCGACACCGCTG
CCGGGTTGCGTCATCTGGAAGGCGTGCTTGCCACGCGCGAAACGCTCGGCGACGTGCTCGACATGCAGATCGTCGCGTTT
CCGCAATCGGGCGTGCTTGGCCGACCCGGCACCGAAGCGCTGCTCGGCGACGCCCTGAAGGCAGGCGCCGACGTGCTCGG
CGCGCTCGATCCCGCGTTGATCGACGGCGACCCGGTGGCGTCGCTCGATCTGACTTTCGATCTCGCGCAGCGGCATGCGA
AGCCGATCGACATCCATCTGCACGAGCCGGGCGAAATCGGCGCGTTCACGCTCGGTCTGCTGCTCGACCGGGTTGCGGCG
CTCGGCATGCAAGGGCAAGTGGTGGTGAGCCATGCGTTCTGTCTCGGCGCGTTGCCCGAGCGCGAACGCGACGCCCTGCT
CGAACGGCTGGCCGCTCTGCGCGTTGCGTTGCTCACCACCGCTCCGCCATCGACAACCGTTCCGCCGCTCAAGGCCTGCC
TCGAAAAAGGCGTGACCTTGTTCGGCGGCAACGACGGCGTGCGCGACACGTGGACACCCTACGGCTCGCCCGACATGCTC
GAACGCGCGATGCTGATCGCAATGCGCTACGGCCTGCGCCGCGACGACGACCTCGCCATCGCATTCGACTGCGTGAGCAC
CGCCGCCGCGCAGGCCTGCGGATTCGCCGACTATGGCTTGCACGCGGGCGCGCGCGCCGACCTCGTGCTGGTGGACGCGG
ACACGGTCGCGCATGCGCTCGTCGCCCGGCCGCCGAGAAAGCTCGTGGTGTCGCACGGCCGGATCGTCGCGCGTAGCGGC
ACGCACGCAAGCCACTGA

Upstream 100 bases:

>100_bases
TCCGCCGGGTCGGCAACACGTCTATTGGTCAGACAATTGAACGCGTCTTCGACCGTGCACCACCGGCCTCTGTCTCTCGC
ATAACAACCGCCCTGCTTTC

Downstream 100 bases:

>100_bases
AAAACGCGTGGCAGAGGCCGGCCGTATTCCGATTCACACGGCGGCGTACACACCGGCCATCCGCGGCTCTCGAAACGGCG
CGCGTCCTGCATCACATCAC

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYR
NEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAF
PQSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA
LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDML
ERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSG
THASH

Sequences:

>Translated_405_residues
MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYR
NEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAF
PQSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA
LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDML
ERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSG
THASH
>Mature_404_residues
PTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLPGFVEGHTHLDKTSWGLPWYRN
EVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAGTTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFP
QSGVLGRPGTEALLGDALKAGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAAL
GMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTLFGGNDGVRDTWTPYGSPDMLE
RAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGLHAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGT
HASH

Specific function: Transforms N-isopropylammelide to cyanuric acid and isopropylamine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

Organism=Escherichia coli, GI1786517, Length=381, Percent_Identity=32.5459317585302, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1786531, Length=402, Percent_Identity=29.6019900497512, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.99.4 [H]

Molecular weight: Translated: 42859; Mature: 42728

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLP
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEC
GFVEGHTHLDKTSWGLPWYRNEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAG
CHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
TTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFPQSGVLGRPGTEALLGDALK
CHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH
AGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA
HHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTL
CCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEE
FGGNDGVRDTWTPYGSPDMLERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGL
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHCC
HAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGTHASH
CCCCCCCEEEEECHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure 
PTTASDLPTTGLLITDVRLANGARVDVSIAAGRIAALGPDLPREPNLTVEDGAGALLLP
CCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEEECCCCEEEEC
GFVEGHTHLDKTSWGLPWYRNEVGPKLTDRIENERRWRAQSGHDAGQQSLALARAFMQAG
CHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
TTRLRTHVDIDTAAGLRHLEGVLATRETLGDVLDMQIVAFPQSGVLGRPGTEALLGDALK
CHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH
AGADVLGALDPALIDGDPVASLDLTFDLAQRHAKPIDIHLHEPGEIGAFTLGLLLDRVAA
HHHHHHHCCCCHHCCCCCCEEEEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
LGMQGQVVVSHAFCLGALPERERDALLERLAALRVALLTTAPPSTTVPPLKACLEKGVTL
CCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEE
FGGNDGVRDTWTPYGSPDMLERAMLIAMRYGLRRDDDLAIAFDCVSTAAAQACGFADYGL
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHCC
HAGARADLVLVDADTVAHALVARPPRKLVVSHGRIVARSGTHASH
CCCCCCCEEEEECHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9422605 [H]