| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pkn1 [H]
Identifier: 91783680
GI number: 91783680
Start: 2561240
End: 2562394
Strand: Direct
Name: pkn1 [H]
Synonym: Bxe_A2134
Alternate gene names: 91783680
Gene position: 2561240-2562394 (Clockwise)
Preceding gene: 91783672
Following gene: 91783681
Centisome position: 52.31
GC content: 65.45
Gene sequence:
>1155_bases ATGTTGTGGGGCGCCCTGCTCGTCATACTGCCCGCCTGTGTCGGCGCCGCGGTCAGTTGGGCCTTCACGCCGCACGCACC CGCTCACCCGCAAATCGTTTTCGGCGACGGCACGCATGGTCCGCTCGGCATGGCGTGGGTGCCCGGCGGCCAGTTCCTCA TGGGCAGCGACGCCAAACAGGCGCAACCGAACGAACGCCCCGCGCACAAGGTCAAGGTGCACGGCTTCTGGATGGACCGC CATCACGTGACCAACGCCGAATTCCGCCGCTTCGTCGAAGCGACCGGCTACGTCACCACGGCCGAGAAGAAACCCGACTG GGAGACCCTGAAAGTCCAGTTGCCGCCCGGCACGCCGCGCCCGCCCGAGAGCGCGATGGTGGCGGGTGCAATGGTGTTCG TCGGCACCAGCCGTCCCGTGCCGCTAGACGACTATTCGCAGTGGTGGCGCTATGTGCCTGGCGCTAACTGGCGTCATCCA GCCGGGCCTGAGAGCAACATCATCGGTAAAGATGATCACCCCGTGGTTCAAGTGTCCTACGAAGATGCGCAGGCTTATGC GAAATGGGCCGGCAAGCGTCTGCCGACCGAAGCCGAATGGGAATTCGCCGCGCGCGGCGGCCTCGAACAGGCCACGTATG CGTGGGGCGATCAGTTCTCTCCCAACGGCAAACAGATGGCCAACGTCTGGCAGGGCCAGCAGCCGCAGTCTTTCCCCGTT GTCAACCCGAAAGCGGGTGGCGCGCTCGGTACAAGTCCGGTGGGTACTTTCCCGGCCAACGGCTACGGCCTTTCCGACAT GACCGGCAACGCCTGGCAGTGGGTTGCCGACTGGTATCGCGCGGATCAGTTCAGGCGTGAGGCGGTAAGCACCAGCGCGA TCGACAATCCGGTGGGCCCGAGCGAGTCGTGGGACCCCGCAGACCAGGGCGTGCCCGTCAACGCGCCCAAGCGTGTCACA CGCGGCGGTTCGTTCCTCTGCAACGAAATCTATTGCCTGAGCTACCGGCCCAGCGCGAGACGCGGCACCGATCCCTACAA CAGCATGTCGCATCTGGGCTTCCGGCTGGTGATGGACGAAGACACCTGGAAAGAAGCCGGTGCTCGCCAGGCTTCGGCGA AAGCTGCCGGCGCGCCTGGAACCCCTGGCGGCTAG
Upstream 100 bases:
>100_bases AAAAATGAAGAGTGAAAGAGATCGAGAGCCCGCAAAGTCGTCCCGCTCGAACGGGTCGGTCGCAGCAACCCAAACGCGCG CCGGTCGCGTGCGCAAACTA
Downstream 100 bases:
>100_bases CGCACACCGTACCGCTGGAAAACCCTTAGTTTCCGCGCCCGTAATCCGCCGGCGCGCATCGCGATCGTCCGTCTGATCGC CCATCTAATTGAACCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLWGALLVILPACVGAAVSWAFTPHAPAHPQIVFGDGTHGPLGMAWVPGGQFLMGSDAKQAQPNERPAHKVKVHGFWMDR HHVTNAEFRRFVEATGYVTTAEKKPDWETLKVQLPPGTPRPPESAMVAGAMVFVGTSRPVPLDDYSQWWRYVPGANWRHP AGPESNIIGKDDHPVVQVSYEDAQAYAKWAGKRLPTEAEWEFAARGGLEQATYAWGDQFSPNGKQMANVWQGQQPQSFPV VNPKAGGALGTSPVGTFPANGYGLSDMTGNAWQWVADWYRADQFRREAVSTSAIDNPVGPSESWDPADQGVPVNAPKRVT RGGSFLCNEIYCLSYRPSARRGTDPYNSMSHLGFRLVMDEDTWKEAGARQASAKAAGAPGTPGG
Sequences:
>Translated_384_residues MLWGALLVILPACVGAAVSWAFTPHAPAHPQIVFGDGTHGPLGMAWVPGGQFLMGSDAKQAQPNERPAHKVKVHGFWMDR HHVTNAEFRRFVEATGYVTTAEKKPDWETLKVQLPPGTPRPPESAMVAGAMVFVGTSRPVPLDDYSQWWRYVPGANWRHP AGPESNIIGKDDHPVVQVSYEDAQAYAKWAGKRLPTEAEWEFAARGGLEQATYAWGDQFSPNGKQMANVWQGQQPQSFPV VNPKAGGALGTSPVGTFPANGYGLSDMTGNAWQWVADWYRADQFRREAVSTSAIDNPVGPSESWDPADQGVPVNAPKRVT RGGSFLCNEIYCLSYRPSARRGTDPYNSMSHLGFRLVMDEDTWKEAGARQASAKAAGAPGTPGG >Mature_384_residues MLWGALLVILPACVGAAVSWAFTPHAPAHPQIVFGDGTHGPLGMAWVPGGQFLMGSDAKQAQPNERPAHKVKVHGFWMDR HHVTNAEFRRFVEATGYVTTAEKKPDWETLKVQLPPGTPRPPESAMVAGAMVFVGTSRPVPLDDYSQWWRYVPGANWRHP AGPESNIIGKDDHPVVQVSYEDAQAYAKWAGKRLPTEAEWEFAARGGLEQATYAWGDQFSPNGKQMANVWQGQQPQSFPV VNPKAGGALGTSPVGTFPANGYGLSDMTGNAWQWVADWYRADQFRREAVSTSAIDNPVGPSESWDPADQGVPVNAPKRVT RGGSFLCNEIYCLSYRPSARRGTDPYNSMSHLGFRLVMDEDTWKEAGARQASAKAAGAPGTPGG
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=317, Percent_Identity=41.6403785488959, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI257470975, Length=318, Percent_Identity=39.622641509434, Blast_Score=230, Evalue=1e-60, Organism=Homo sapiens, GI257470977, Length=317, Percent_Identity=38.4858044164038, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI194248088, Length=325, Percent_Identity=35.0769230769231, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI194248087, Length=319, Percent_Identity=33.8557993730408, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI194248090, Length=230, Percent_Identity=38.695652173913, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI226437577, Length=215, Percent_Identity=40.4651162790698, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI20130397, Length=332, Percent_Identity=36.4457831325301, Blast_Score=199, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 41752; Mature: 41752
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWGALLVILPACVGAAVSWAFTPHAPAHPQIVFGDGTHGPLGMAWVPGGQFLMGSDAKQ CHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCHHH AQPNERPAHKVKVHGFWMDRHHVTNAEFRRFVEATGYVTTAEKKPDWETLKVQLPPGTPR CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCC PPESAMVAGAMVFVGTSRPVPLDDYSQWWRYVPGANWRHPAGPESNIIGKDDHPVVQVSY CCHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEH EDAQAYAKWAGKRLPTEAEWEFAARGGLEQATYAWGDQFSPNGKQMANVWQGQQPQSFPV HHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC VNPKAGGALGTSPVGTFPANGYGLSDMTGNAWQWVADWYRADQFRREAVSTSAIDNPVGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SESWDPADQGVPVNAPKRVTRGGSFLCNEIYCLSYRPSARRGTDPYNSMSHLGFRLVMDE CCCCCCCCCCCCCCCCHHHHCCCCEEECEEEEEECCCCCCCCCCCHHHHHHCCEEEEECC DTWKEAGARQASAKAAGAPGTPGG CHHHHHCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MLWGALLVILPACVGAAVSWAFTPHAPAHPQIVFGDGTHGPLGMAWVPGGQFLMGSDAKQ CHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCHHH AQPNERPAHKVKVHGFWMDRHHVTNAEFRRFVEATGYVTTAEKKPDWETLKVQLPPGTPR CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCC PPESAMVAGAMVFVGTSRPVPLDDYSQWWRYVPGANWRHPAGPESNIIGKDDHPVVQVSY CCHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEH EDAQAYAKWAGKRLPTEAEWEFAARGGLEQATYAWGDQFSPNGKQMANVWQGQQPQSFPV HHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC VNPKAGGALGTSPVGTFPANGYGLSDMTGNAWQWVADWYRADQFRREAVSTSAIDNPVGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SESWDPADQGVPVNAPKRVTRGGSFLCNEIYCLSYRPSARRGTDPYNSMSHLGFRLVMDE CCCCCCCCCCCCCCCCHHHHCCCCEEECEEEEEECCCCCCCCCCCHHHHHHCCEEEEECC DTWKEAGARQASAKAAGAPGTPGG CHHHHHCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12682364 [H]