| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yedY [H]
Identifier: 91783638
GI number: 91783638
Start: 2511639
End: 2512415
Strand: Direct
Name: yedY [H]
Synonym: Bxe_A2177
Alternate gene names: 91783638
Gene position: 2511639-2512415 (Clockwise)
Preceding gene: 91783637
Following gene: 91783655
Centisome position: 51.3
GC content: 58.56
Gene sequence:
>777_bases ATGAAGCCATTCAAACCTTCGTCGCCGGGCGTGGATCGGGCGTCGCTCGCTATCGACGTGCGACGTGAACTCGATATGCC GTCACGCAGGCTGTTCGGCAAGCGCATCATCACGCTCGGTGGCCTTGCCATGCTGACCGGATGCAGCCTGTCGGACGACA AATCGGTCGAAACGTTCTTATCGCGCGTGTCGAAAATCAACGACAGCGTGCAGGGCTGGCTGTTCGATCCGAATCGTCTC GCGCCGACCTACACGGAAGCACAGATCACGCGTCCGTTCCCGTTCAACGCGTTCTACGGCATCGACGATGTCCCGCACGT GGACGGCAGCGACTTCCGGTTGAAAGTCAGCGGCCTCGTGCAGGAAAAGAAGACATGGACCCTCGACGATCTGTACGCGT TGCCGAAAGCCGAACAGATTACGCGGCATATCTGCGTAGAAGGATGGAGCGCGATCGGCCGCTGGGGCGGCACGCCGTTT GCCGAATTCCTGAAACGCGTGGGTGCTGATACGTCGGCGAAATACGTCGGCTTCAAATGCGCCGACGACTATTACGAAAG CATCGATATGCCGACGGCGCTGCACCCGCAGACACTGCTGACCTTCACCTACGACGGCCAGCAATTGCCGGCAAAATACG GCTATCCGATGAAGCTCAGGATGCCTACCAAACTCGGCTACAAGAACCCCAAGCACATCATGGAAATCTTCGTGACCAAT GCGTTTCCAGGCGGCTACTGGGTCGACCAGGGCTACAACTGGTTCGGCGGTTCGTGA
Upstream 100 bases:
>100_bases TTGCTGGCCGGCTTTATCGTCGTCCATCTGACGATGGTGGCGCTTGTGCCGCGTTCGTTGCTCACCATGATTCGCGGCCG CTAACCGGGGGAGTAAAACC
Downstream 100 bases:
>100_bases GCGGCGGGCCGGATACGATTACGTTCGAGCACCGGAACCCGGAAAGAACCGGTTCTCAGGCCGCGGCAGTCCCAGATTTT CTCGCAGCGTGGCCCCTTCG
Product: putative oxidoreductase, molybdopterin binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN AFPGGYWVDQGYNWFGGS
Sequences:
>Translated_258_residues MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN AFPGGYWVDQGYNWFGGS >Mature_258_residues MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN AFPGGYWVDQGYNWFGGS
Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedY family [H]
Homologues:
Organism=Escherichia coli, GI1788282, Length=181, Percent_Identity=31.4917127071823, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 - InterPro: IPR006311 - InterPro: IPR022867 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 29046; Mature: 29046
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFL CCCCCCCCCCCCHHHEEEEHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH SRVSKINDSVQGWLFDPNRLAPTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLV HHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECHH QEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPFAEFLKRVGADTSAKYVGFKC HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE ADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHC AFPGGYWVDQGYNWFGGS CCCCCEEECCCCCCCCCC >Mature Secondary Structure MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFL CCCCCCCCCCCCHHHEEEEHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH SRVSKINDSVQGWLFDPNRLAPTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLV HHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECHH QEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPFAEFLKRVGADTSAKYVGFKC HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE ADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHC AFPGGYWVDQGYNWFGGS CCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]