Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yedY [H]

Identifier: 91783638

GI number: 91783638

Start: 2511639

End: 2512415

Strand: Direct

Name: yedY [H]

Synonym: Bxe_A2177

Alternate gene names: 91783638

Gene position: 2511639-2512415 (Clockwise)

Preceding gene: 91783637

Following gene: 91783655

Centisome position: 51.3

GC content: 58.56

Gene sequence:

>777_bases
ATGAAGCCATTCAAACCTTCGTCGCCGGGCGTGGATCGGGCGTCGCTCGCTATCGACGTGCGACGTGAACTCGATATGCC
GTCACGCAGGCTGTTCGGCAAGCGCATCATCACGCTCGGTGGCCTTGCCATGCTGACCGGATGCAGCCTGTCGGACGACA
AATCGGTCGAAACGTTCTTATCGCGCGTGTCGAAAATCAACGACAGCGTGCAGGGCTGGCTGTTCGATCCGAATCGTCTC
GCGCCGACCTACACGGAAGCACAGATCACGCGTCCGTTCCCGTTCAACGCGTTCTACGGCATCGACGATGTCCCGCACGT
GGACGGCAGCGACTTCCGGTTGAAAGTCAGCGGCCTCGTGCAGGAAAAGAAGACATGGACCCTCGACGATCTGTACGCGT
TGCCGAAAGCCGAACAGATTACGCGGCATATCTGCGTAGAAGGATGGAGCGCGATCGGCCGCTGGGGCGGCACGCCGTTT
GCCGAATTCCTGAAACGCGTGGGTGCTGATACGTCGGCGAAATACGTCGGCTTCAAATGCGCCGACGACTATTACGAAAG
CATCGATATGCCGACGGCGCTGCACCCGCAGACACTGCTGACCTTCACCTACGACGGCCAGCAATTGCCGGCAAAATACG
GCTATCCGATGAAGCTCAGGATGCCTACCAAACTCGGCTACAAGAACCCCAAGCACATCATGGAAATCTTCGTGACCAAT
GCGTTTCCAGGCGGCTACTGGGTCGACCAGGGCTACAACTGGTTCGGCGGTTCGTGA

Upstream 100 bases:

>100_bases
TTGCTGGCCGGCTTTATCGTCGTCCATCTGACGATGGTGGCGCTTGTGCCGCGTTCGTTGCTCACCATGATTCGCGGCCG
CTAACCGGGGGAGTAAAACC

Downstream 100 bases:

>100_bases
GCGGCGGGCCGGATACGATTACGTTCGAGCACCGGAACCCGGAAAGAACCGGTTCTCAGGCCGCGGCAGTCCCAGATTTT
CTCGCAGCGTGGCCCCTTCG

Product: putative oxidoreductase, molybdopterin binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL
APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF
AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN
AFPGGYWVDQGYNWFGGS

Sequences:

>Translated_258_residues
MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL
APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF
AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN
AFPGGYWVDQGYNWFGGS
>Mature_258_residues
MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFLSRVSKINDSVQGWLFDPNRL
APTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLVQEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPF
AEFLKRVGADTSAKYVGFKCADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN
AFPGGYWVDQGYNWFGGS

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=181, Percent_Identity=31.4917127071823, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29046; Mature: 29046

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFL
CCCCCCCCCCCCHHHEEEEHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH
SRVSKINDSVQGWLFDPNRLAPTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLV
HHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
QEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPFAEFLKRVGADTSAKYVGFKC
HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE
ADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN
HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHC
AFPGGYWVDQGYNWFGGS
CCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKPFKPSSPGVDRASLAIDVRRELDMPSRRLFGKRIITLGGLAMLTGCSLSDDKSVETFL
CCCCCCCCCCCCHHHEEEEHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH
SRVSKINDSVQGWLFDPNRLAPTYTEAQITRPFPFNAFYGIDDVPHVDGSDFRLKVSGLV
HHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
QEKKTWTLDDLYALPKAEQITRHICVEGWSAIGRWGGTPFAEFLKRVGADTSAKYVGFKC
HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEE
ADDYYESIDMPTALHPQTLLTFTYDGQQLPAKYGYPMKLRMPTKLGYKNPKHIMEIFVTN
HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCHHHHHHHHHHC
AFPGGYWVDQGYNWFGGS
CCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]