| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783637
Identifier: 91783637
GI number: 91783637
Start: 2510996
End: 2511622
Strand: Direct
Name: 91783637
Synonym: Bxe_A2178
Alternate gene names: NA
Gene position: 2510996-2511622 (Clockwise)
Preceding gene: 91783636
Following gene: 91783638
Centisome position: 51.29
GC content: 62.84
Gene sequence:
>627_bases ATGAACGCGATCCCCCAACCCGGCGCATCGCAAGACAGGTCGCGCACGATTCAACCCGCGTGGGTACGTATCGCGCACTG GCTCAACGCGCTCGCTGCGGTGCTGATGATGCTCTCGGGCTGGCGAATCTACGACGCGTCGCCGGTATTCGCGGGTTTCA GGATTCCCACCGGCATCACGCTCGGCGGCTGGCTCGGCGGTGCGTTGCAGTGGCACTTCGCGGCGATGTGGCTGCTGTTT TTCAACGCCCTCTTCTATCTGGCGATGAACCTCGTCACCGGACGGCTCAGGTCGAAGTTCTTCCCGCTGTCGCCGCGCGC GATCCTGCACGACCTCGGCGAGGCGCTGAAAGGCCATCTGTCGCACGCGGACCCGAGCCGCTACAACGCGGTGCAGAAGT TCGCGTATCTGTTCGTGATGCTCGACATCGCCATCCTGATCCTGTCGGGGCTCGCGATCTGGAAATCGGTGCAGTTTCCG TTGCTGCGCGACCTGATGGGCGGATACGACAATGCGCGCGTCGTTCACTTCTGCGCAATGGCCTTGCTGGCCGGCTTTAT CGTCGTCCATCTGACGATGGTGGCGCTTGTGCCGCGTTCGTTGCTCACCATGATTCGCGGCCGCTAA
Upstream 100 bases:
>100_bases GATGAAAAAAGGCGACGCGATGAGCAAGTAAGTACCCGAGGTGCATTCCCGGCCCGCAGGCCGCGAATGCACCTGCGGAT TCCACTACCGGAGGTTCACC
Downstream 100 bases:
>100_bases CCGGGGGAGTAAAACCATGAAGCCATTCAAACCTTCGTCGCCGGGCGTGGATCGGGCGTCGCTCGCTATCGACGTGCGAC GTGAACTCGATATGCCGTCA
Product: putative transmembrane hydrogenase cytochrome B- type subunit
Products: NA
Alternate protein names: Thiosulfate Reductase Cytochrome B Subunit; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Ni/Fe-Hydrogenase B-Type Cytochrome Subunit; Cytochrome; Cytochrome B/B6 Domain Protein; Conserved Protein; Transmembrane Cytochrome B-Type Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNAIPQPGASQDRSRTIQPAWVRIAHWLNALAAVLMMLSGWRIYDASPVFAGFRIPTGITLGGWLGGALQWHFAAMWLLF FNALFYLAMNLVTGRLRSKFFPLSPRAILHDLGEALKGHLSHADPSRYNAVQKFAYLFVMLDIAILILSGLAIWKSVQFP LLRDLMGGYDNARVVHFCAMALLAGFIVVHLTMVALVPRSLLTMIRGR
Sequences:
>Translated_208_residues MNAIPQPGASQDRSRTIQPAWVRIAHWLNALAAVLMMLSGWRIYDASPVFAGFRIPTGITLGGWLGGALQWHFAAMWLLF FNALFYLAMNLVTGRLRSKFFPLSPRAILHDLGEALKGHLSHADPSRYNAVQKFAYLFVMLDIAILILSGLAIWKSVQFP LLRDLMGGYDNARVVHFCAMALLAGFIVVHLTMVALVPRSLLTMIRGR >Mature_208_residues MNAIPQPGASQDRSRTIQPAWVRIAHWLNALAAVLMMLSGWRIYDASPVFAGFRIPTGITLGGWLGGALQWHFAAMWLLF FNALFYLAMNLVTGRLRSKFFPLSPRAILHDLGEALKGHLSHADPSRYNAVQKFAYLFVMLDIAILILSGLAIWKSVQFP LLRDLMGGYDNARVVHFCAMALLAGFIVVHLTMVALVPRSLLTMIRGR
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23191; Mature: 23191
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIPQPGASQDRSRTIQPAWVRIAHWLNALAAVLMMLSGWRIYDASPVFAGFRIPTGIT CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHCCCCCCCCCC LGGWLGGALQWHFAAMWLLFFNALFYLAMNLVTGRLRSKFFPLSPRAILHDLGEALKGHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC SHADPSRYNAVQKFAYLFVMLDIAILILSGLAIWKSVQFPLLRDLMGGYDNARVVHFCAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHH ALLAGFIVVHLTMVALVPRSLLTMIRGR HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAIPQPGASQDRSRTIQPAWVRIAHWLNALAAVLMMLSGWRIYDASPVFAGFRIPTGIT CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHCCCCCCCCCC LGGWLGGALQWHFAAMWLLFFNALFYLAMNLVTGRLRSKFFPLSPRAILHDLGEALKGHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC SHADPSRYNAVQKFAYLFVMLDIAILILSGLAIWKSVQFPLLRDLMGGYDNARVVHFCAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHH ALLAGFIVVHLTMVALVPRSLLTMIRGR HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA