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The map label for this gene is nudC [H]

Identifier: 91783627

GI number: 91783627

Start: 2501760

End: 2502707

Strand: Direct

Name: nudC [H]

Synonym: Bxe_A2188

Alternate gene names: 91783627

Gene position: 2501760-2502707 (Clockwise)

Preceding gene: 91783625

Following gene: 91783636

Centisome position: 51.1

GC content: 65.82

Gene sequence:

>948_bases
GTGATAACCGCCCTTCCCGCGTCCATCGGCTTTAACCTCAACCCGCTGGAGCGCCGCTCCGACAAGCGGGACGACCACGC
CTACCTCGAGCATCTGCGCAGCGACCCGGCCGCGCGTTTTCTCGTCTTCGACGGCGACGTGCCCCTGCTCAAGCGAGGCA
GCGAGCACGACCCGTGGTTCGCCTCCAGCGAGACCGCGGCCTTCGGCCAACCGTTGCATAGCGTCTTCCTCGGGGAAGAC
GCCGACGGCAGCGGACGCTTCGCGCTTGGCTTCGCGCTCGACCTTGCGCCAGAGGCTCCTTTGCCAGGCACCGGCCATGA
GCGCATCGACGTTCGCTCGCTCGCGCAGCAGGGCCTCGTCGCCGCGGGAACGCTCGGCATACTGGCGGAGGCGAAGTCGA
TGCTCGACTGGCATCGCCGCCACGCTTTCTGCGCGAACTGCGGCTCTGCGAGCCGCGTCGCGATGGCGGGCTGGCAACGC
GCGTGCGATGTTTGTGGCGCACGCCATTTTCCCCGCGTGGATCCAGTCGTGATCATGCTGGTGATAGACGGCGAACGTTG
TCTGCTCGGCCGCCAGCGCCATTTTGCCCCGGGCATGTATTCGGCGCTTGCCGGTTTCGTTGAGCCGGGCGAGACGGCGG
AAGACGCCGTGCGCCGCGAAGTAATGGAAGAGGCTCGCCTGAAGTGCGAACAGGTTGTCTACTTCGCGTCGCAGCCGTGG
CCCTTTCCTTCGTCGCTGATGATTGGCTGCTTTGCACAGGCAAGCGATACCGACATCGTCGTCGATACTGAAGAACTCGA
AGACGCTCGCTGGTTCACGCGCCAGGAGGTCGCGGCAATGCTCGCGGGAACGCATGCGCACGGGCTGTCGGCACCCAAGC
CGTTCGCCATTGCCCATCATCTGCTGCGCGCGTACGTGGAGCAAGGCGGCTCGGTATTGCCCGGCTGA

Upstream 100 bases:

>100_bases
GAAAAATACCATGCCGCCTGAATCCTCATGAACCCCGGCCTGCGAGCGCACTGAACCCCGTGCCATACTTGCGGATCCTC
CTGTCCCTCTGTCAACGACC

Downstream 100 bases:

>100_bases
GGGTCCCGCAGAAAGAGCGCTGCGCTTACGGCACGGCACCGCCGCGGCGATTCCGTTGCCCGCGCAGACGCTTCGCACTC
CGGCTTGGTCGCGATCGGGT

Product: putative phosphohydrolase, MutT/NUDIX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MITALPASIGFNLNPLERRSDKRDDHAYLEHLRSDPAARFLVFDGDVPLLKRGSEHDPWFASSETAAFGQPLHSVFLGED
ADGSGRFALGFALDLAPEAPLPGTGHERIDVRSLAQQGLVAAGTLGILAEAKSMLDWHRRHAFCANCGSASRVAMAGWQR
ACDVCGARHFPRVDPVVIMLVIDGERCLLGRQRHFAPGMYSALAGFVEPGETAEDAVRREVMEEARLKCEQVVYFASQPW
PFPSSLMIGCFAQASDTDIVVDTEELEDARWFTRQEVAAMLAGTHAHGLSAPKPFAIAHHLLRAYVEQGGSVLPG

Sequences:

>Translated_315_residues
MITALPASIGFNLNPLERRSDKRDDHAYLEHLRSDPAARFLVFDGDVPLLKRGSEHDPWFASSETAAFGQPLHSVFLGED
ADGSGRFALGFALDLAPEAPLPGTGHERIDVRSLAQQGLVAAGTLGILAEAKSMLDWHRRHAFCANCGSASRVAMAGWQR
ACDVCGARHFPRVDPVVIMLVIDGERCLLGRQRHFAPGMYSALAGFVEPGETAEDAVRREVMEEARLKCEQVVYFASQPW
PFPSSLMIGCFAQASDTDIVVDTEELEDARWFTRQEVAAMLAGTHAHGLSAPKPFAIAHHLLRAYVEQGGSVLPG
>Mature_315_residues
MITALPASIGFNLNPLERRSDKRDDHAYLEHLRSDPAARFLVFDGDVPLLKRGSEHDPWFASSETAAFGQPLHSVFLGED
ADGSGRFALGFALDLAPEAPLPGTGHERIDVRSLAQQGLVAAGTLGILAEAKSMLDWHRRHAFCANCGSASRVAMAGWQR
ACDVCGARHFPRVDPVVIMLVIDGERCLLGRQRHFAPGMYSALAGFVEPGETAEDAVRREVMEEARLKCEQVVYFASQPW
PFPSSLMIGCFAQASDTDIVVDTEELEDARWFTRQEVAAMLAGTHAHGLSAPKPFAIAHHLLRAYVEQGGSVLPG

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=340, Percent_Identity=38.8235294117647, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI50593112, Length=263, Percent_Identity=39.5437262357414, Blast_Score=161, Evalue=6e-40,
Organism=Escherichia coli, GI48994995, Length=165, Percent_Identity=35.7575757575758, Blast_Score=120, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71986510, Length=202, Percent_Identity=34.1584158415842, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI212645999, Length=202, Percent_Identity=34.1584158415842, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321371, Length=212, Percent_Identity=33.0188679245283, Blast_Score=113, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 34299; Mature: 34299

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITALPASIGFNLNPLERRSDKRDDHAYLEHLRSDPAARFLVFDGDVPLLKRGSEHDPWF
CCEECCHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCC
ASSETAAFGQPLHSVFLGEDADGSGRFALGFALDLAPEAPLPGTGHERIDVRSLAQQGLV
CCCCCHHHHCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCH
AAGTLGILAEAKSMLDWHRRHAFCANCGSASRVAMAGWQRACDVCGARHFPRVDPVVIML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VIDGERCLLGRQRHFAPGMYSALAGFVEPGETAEDAVRREVMEEARLKCEQVVYFASQPW
EECCCHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC
PFPSSLMIGCFAQASDTDIVVDTEELEDARWFTRQEVAAMLAGTHAHGLSAPKPFAIAHH
CCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LLRAYVEQGGSVLPG
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MITALPASIGFNLNPLERRSDKRDDHAYLEHLRSDPAARFLVFDGDVPLLKRGSEHDPWF
CCEECCHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCC
ASSETAAFGQPLHSVFLGEDADGSGRFALGFALDLAPEAPLPGTGHERIDVRSLAQQGLV
CCCCCHHHHCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCH
AAGTLGILAEAKSMLDWHRRHAFCANCGSASRVAMAGWQRACDVCGARHFPRVDPVVIML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VIDGERCLLGRQRHFAPGMYSALAGFVEPGETAEDAVRREVMEEARLKCEQVVYFASQPW
EECCCHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC
PFPSSLMIGCFAQASDTDIVVDTEELEDARWFTRQEVAAMLAGTHAHGLSAPKPFAIAHH
CCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LLRAYVEQGGSVLPG
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA