| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is srpB [H]
Identifier: 91783606
GI number: 91783606
Start: 2479647
End: 2480135
Strand: Direct
Name: srpB [H]
Synonym: Bxe_A2209
Alternate gene names: 91783606
Gene position: 2479647-2480135 (Clockwise)
Preceding gene: 91783605
Following gene: 91783611
Centisome position: 50.65
GC content: 65.44
Gene sequence:
>489_bases ATGACCAACTGGTGGCAGGTGGTGTGGGGAACTGCACGCGCAGAATTCTCCGATCTCGGCAGCGCGGCCGACGTCACGCA GGTGCTGATGCGCCTCGGACTCGCATTGATACTCGGCGGCATACTCGGATTCGAGCGTGAGATGTCACGGCGCGACGCCG GCATGCGCACGCATATGATGGTGTCGGTCGGCGCGGCCTTGTTCGTGGTCGTGCCGCTGCAGGCCGGTTTCTCGCAGGAC AATATGAGCCGGGTGCTGCAAGGCCTCGTGTCCGGAGTCGGTTTTCTCGGCGCGGGCGCGATCATCAAGCTCAGTGCGGA GCGCGAGGTGCGTGGGCTGACTACGGCGGCGAGCTTGTGGTTGAGCGCGGGCGTCGGCGTGGCGGCGGGGTTGGGGCGCG AAGCTACGGCGATTCTCAGCGTGGCGATTGCGCTTGCTATTCTGTCGAGCGCGCGGCTGTTCAAGAGTCGCGAGGGGGAG GAGAAGTAG
Upstream 100 bases:
>100_bases GTAGTGAGCGCGTTCGTAAAGAAGACCTCGGCGGGGTGAAGCACGCGGCGCGGCGATATTGCCGTATGCTTGGCGTTTTC CGGAACGTCGGGCAAATGTA
Downstream 100 bases:
>100_bases GGCGAAATTTTACTGGTTGGCCCGCAGCGTGTTGTCGGGCTGGTTGGTTTGGACGCTCGCGCCGGGCTTGTTGTTGGGTG CTTGTGCGAGCGAAGCGGTC
Product: Mg2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTNWWQVVWGTARAEFSDLGSAADVTQVLMRLGLALILGGILGFEREMSRRDAGMRTHMMVSVGAALFVVVPLQAGFSQD NMSRVLQGLVSGVGFLGAGAIIKLSAEREVRGLTTAASLWLSAGVGVAAGLGREATAILSVAIALAILSSARLFKSREGE EK
Sequences:
>Translated_162_residues MTNWWQVVWGTARAEFSDLGSAADVTQVLMRLGLALILGGILGFEREMSRRDAGMRTHMMVSVGAALFVVVPLQAGFSQD NMSRVLQGLVSGVGFLGAGAIIKLSAEREVRGLTTAASLWLSAGVGVAAGLGREATAILSVAIALAILSSARLFKSREGE EK >Mature_161_residues TNWWQVVWGTARAEFSDLGSAADVTQVLMRLGLALILGGILGFEREMSRRDAGMRTHMMVSVGAALFVVVPLQAGFSQDN MSRVLQGLVSGVGFLGAGAIIKLSAEREVRGLTTAASLWLSAGVGVAAGLGREATAILSVAIALAILSSARLFKSREGEE K
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=130, Percent_Identity=38.4615384615385, Blast_Score=77, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 17006; Mature: 16875
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNWWQVVWGTARAEFSDLGSAADVTQVLMRLGLALILGGILGFEREMSRRDAGMRTHMM CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSVGAALFVVVPLQAGFSQDNMSRVLQGLVSGVGFLGAGAIIKLSAEREVRGLTTAASLW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH LSAGVGVAAGLGREATAILSVAIALAILSSARLFKSREGEEK HHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNWWQVVWGTARAEFSDLGSAADVTQVLMRLGLALILGGILGFEREMSRRDAGMRTHMM CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSVGAALFVVVPLQAGFSQDNMSRVLQGLVSGVGFLGAGAIIKLSAEREVRGLTTAASLW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH LSAGVGVAAGLGREATAILSVAIALAILSSARLFKSREGEEK HHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7536734 [H]